Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

HOMEZ (homeobox and leucine zipper encoding)

Identity

Alias_namesKIAA1443
KIAA1443
Other alias
HGNC (Hugo) HOMEZ
LocusID (NCBI) 57594
Atlas_Id 64381
Location 14q11.2  [Link to chromosome band 14q11]
Location_base_pair Starts at 23273635 and ends at 23286100 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
HOMEZ (14q11.2) / FBXO34 (14q22.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)HOMEZ   20164
Cards
Entrez_Gene (NCBI)HOMEZ  57594  homeobox and leucine zipper encoding
AliasesKIAA1443
GeneCards (Weizmann)HOMEZ
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr14:23273635-23286100 [Contig_View]  HOMEZ [Vega]
TCGA cBioPortalHOMEZ
AceView (NCBI)HOMEZ
Genatlas (Paris)HOMEZ
WikiGenes57594
SOURCE (Princeton)HOMEZ
Genetics Home Reference (NIH)HOMEZ
Genomic and cartography
GoldenPath hg38 (UCSC)HOMEZ  -     chr14:23273635-23286100 -  14q11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)HOMEZ  -     14q11.2   [Description]    (hg19-Feb_2009)
EnsemblHOMEZ - 14q11.2 [CytoView hg19]  HOMEZ - 14q11.2 [CytoView hg38]
Mapping of homologs : NCBIHOMEZ [Mapview hg19]  HOMEZ [Mapview hg38]
OMIM608119   
Gene and transcription
Genbank (Entrez)AB037864 AF463523 AK296927 AK301849 AK302788
RefSeq transcript (Entrez)NM_020834
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)HOMEZ
Cluster EST : UnigeneHs.632332 [ NCBI ]
CGAP (NCI)Hs.632332
Gene ExpressionHOMEZ [ NCBI-GEO ]   HOMEZ [ EBI - ARRAY_EXPRESS ]   HOMEZ [ SEEK ]   HOMEZ [ MEM ]
Gene Expression Viewer (FireBrowse)HOMEZ [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)57594
GTEX Portal (Tissue expression)HOMEZ
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8IX15   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8IX15  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8IX15
Splice isoforms : SwissVarQ8IX15
PhosPhoSitePlusQ8IX15
Domaine pattern : Prosite (Expaxy)HOMEOBOX_2 (PS50071)   
Domains : Interpro (EBI)Homeobox-like    Homeobox_dom    Homeobox_KN_domain    Homez_homeobox_dom   
Domain families : Pfam (Sanger)Homeobox_KN (PF05920)    Homez (PF11569)   
Domain families : Pfam (NCBI)pfam05920    pfam11569   
Domain families : Smart (EMBL)HOX (SM00389)  
Conserved Domain (NCBI)HOMEZ
DMDM Disease mutations57594
Blocks (Seattle)HOMEZ
PDB (SRS)2ECC    2YS9   
PDB (PDBSum)2ECC    2YS9   
PDB (IMB)2ECC    2YS9   
PDB (RSDB)2ECC    2YS9   
Structural Biology KnowledgeBase2ECC    2YS9   
SCOP (Structural Classification of Proteins)2ECC    2YS9   
CATH (Classification of proteins structures)2ECC    2YS9   
SuperfamilyQ8IX15
Peptide AtlasQ8IX15
HPRD12167
IPIIPI00477303   IPI00941497   
Protein Interaction databases
DIP (DOE-UCLA)Q8IX15
IntAct (EBI)Q8IX15
BioGRIDHOMEZ
STRING (EMBL)HOMEZ
ZODIACHOMEZ
Ontologies - Pathways
QuickGOQ8IX15
Ontology : AmiGOnegative regulation of transcription from RNA polymerase II promoter  DNA binding  transcription factor activity, sequence-specific DNA binding  transcription corepressor activity  nucleus  nucleus  nucleolus  cytosol  transcription, DNA-templated  
Ontology : EGO-EBInegative regulation of transcription from RNA polymerase II promoter  DNA binding  transcription factor activity, sequence-specific DNA binding  transcription corepressor activity  nucleus  nucleus  nucleolus  cytosol  transcription, DNA-templated  
NDEx NetworkHOMEZ
Atlas of Cancer Signalling NetworkHOMEZ
Wikipedia pathwaysHOMEZ
Orthology - Evolution
OrthoDB57594
Phylogenetic Trees/Animal Genes : TreeFamHOMEZ
HOVERGENQ8IX15
HOGENOMQ8IX15
Homologs : HomoloGeneHOMEZ
Homology/Alignments : Family Browser (UCSC)HOMEZ
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerHOMEZ [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)HOMEZ
dbVarHOMEZ
ClinVarHOMEZ
1000_GenomesHOMEZ 
Exome Variant ServerHOMEZ
ExAC (Exome Aggregation Consortium)HOMEZ (select the gene name)
Genetic variants : HAPMAP57594
Genomic Variants (DGV)HOMEZ [DGVbeta]
DECIPHERHOMEZ [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisHOMEZ 
Mutations
ICGC Data PortalHOMEZ 
TCGA Data PortalHOMEZ 
Broad Tumor PortalHOMEZ
OASIS PortalHOMEZ [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICHOMEZ  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDHOMEZ
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch HOMEZ
DgiDB (Drug Gene Interaction Database)HOMEZ
DoCM (Curated mutations)HOMEZ (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)HOMEZ (select a term)
intoGenHOMEZ
Cancer3DHOMEZ(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM608119   
Orphanet
MedgenHOMEZ
Genetic Testing Registry HOMEZ
NextProtQ8IX15 [Medical]
TSGene57594
GENETestsHOMEZ
Target ValidationHOMEZ
Huge Navigator HOMEZ [HugePedia]
snp3D : Map Gene to Disease57594
BioCentury BCIQHOMEZ
ClinGenHOMEZ
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD57594
Chemical/Pharm GKB GenePA162391555
Clinical trialHOMEZ
Miscellaneous
canSAR (ICR)HOMEZ (select the gene name)
Probes
Litterature
PubMed15 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineHOMEZ
EVEXHOMEZ
GoPubMedHOMEZ
iHOPHOMEZ
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:10:41 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.