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HOTTIP (HOXA distal transcript antisense RNA)

Identity

Alias_namesNCRNA00213
non-protein coding RNA 213
HOXA distal transcript antisense RNA (non-protein coding)
Alias_symbol (synonym)HOXA-AS6
RP1-170O19.3
HOXA13-AS1
Other alias
HGNC (Hugo) HOTTIP
LocusID (NCBI) 100316868
Atlas_Id 53902
Location 7p15.2  [Link to chromosome band 7p15]
Location_base_pair Starts at 27200421 and ends at 27207259 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)HOTTIP   37461
Cards
Entrez_Gene (NCBI)HOTTIP  100316868  HOXA distal transcript antisense RNA
AliasesHOXA-AS6; HOXA13-AS1; NCRNA00213
GeneCards (Weizmann)HOTTIP
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr7:27200421-27207259 [Contig_View]  HOTTIP [Vega]
TCGA cBioPortalHOTTIP
AceView (NCBI)HOTTIP
Genatlas (Paris)HOTTIP
WikiGenes100316868
SOURCE (Princeton)HOTTIP
Genetics Home Reference (NIH)HOTTIP
Genomic and cartography
GoldenPath hg38 (UCSC)HOTTIP  -     chr7:27200421-27207259 +  7p15.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)HOTTIP  -     7p15.2   [Description]    (hg19-Feb_2009)
EnsemblHOTTIP - 7p15.2 [CytoView hg19]  HOTTIP - 7p15.2 [CytoView hg38]
Mapping of homologs : NCBIHOTTIP [Mapview hg19]  HOTTIP [Mapview hg38]
OMIM614060   
Gene and transcription
Genbank (Entrez)AK093987 GU724873
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)HOTTIP
Cluster EST : UnigeneHs.199486 [ NCBI ]
CGAP (NCI)Hs.199486
Gene ExpressionHOTTIP [ NCBI-GEO ]   HOTTIP [ EBI - ARRAY_EXPRESS ]   HOTTIP [ SEEK ]   HOTTIP [ MEM ]
Gene Expression Viewer (FireBrowse)HOTTIP [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100316868
GTEX Portal (Tissue expression)HOTTIP
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)HOTTIP
DMDM Disease mutations100316868
Blocks (Seattle)HOTTIP
IPIIPI00844390   
Protein Interaction databases
BioGRIDHOTTIP
STRING (EMBL)HOTTIP
ZODIACHOTTIP
Ontologies - Pathways
Huge Navigator HOTTIP [HugePedia]
snp3D : Map Gene to Disease100316868
BioCentury BCIQHOTTIP
ClinGenHOTTIP
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100316868
Chemical/Pharm GKB GenePA165618182
Clinical trialHOTTIP
Miscellaneous
canSAR (ICR)HOTTIP (select the gene name)
Probes
Litterature
PubMed20 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineHOTTIP
EVEXHOTTIP
GoPubMedHOTTIP
iHOPHOTTIP
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 12:37:16 CEST 2017

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