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HOXA10-AS (HOXA10 antisense RNA)

Identity

Alias_namesHOXA-AS4
HOXA cluster antisense RNA 4 (non-protein coding)
HOXA cluster antisense RNA 4
Other alias
HGNC (Hugo) HOXA10-AS
LocusID (NCBI) 100874323
Atlas_Id 64385
Location 7p15.2  [Link to chromosome band 7p15]
Location_base_pair Starts at 27168899 and ends at 27171915 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)HOXA10-AS   40281
Cards
Entrez_Gene (NCBI)HOXA10-AS  100874323  HOXA10 antisense RNA
AliasesHOXA-AS4
GeneCards (Weizmann)HOXA10-AS
Ensembl hg19 (Hinxton)ENSG00000253187 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000253187 [Gene_View]  chr7:27168899-27171915 [Contig_View]  HOXA10-AS [Vega]
ICGC DataPortalENSG00000253187
TCGA cBioPortalHOXA10-AS
AceView (NCBI)HOXA10-AS
Genatlas (Paris)HOXA10-AS
WikiGenes100874323
SOURCE (Princeton)HOXA10-AS
Genetics Home Reference (NIH)HOXA10-AS
Genomic and cartography
GoldenPath hg38 (UCSC)HOXA10-AS  -     chr7:27168899-27171915 +  7p15.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)HOXA10-AS  -     7p15.2   [Description]    (hg19-Feb_2009)
EnsemblHOXA10-AS - 7p15.2 [CytoView hg19]  HOXA10-AS - 7p15.2 [CytoView hg38]
Mapping of homologs : NCBIHOXA10-AS [Mapview hg19]  HOXA10-AS [Mapview hg38]
Gene and transcription
Genbank (Entrez)BM549446
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)HOXA10-AS
Cluster EST : UnigeneHs.716765 [ NCBI ]
CGAP (NCI)Hs.716765
Alternative Splicing GalleryENSG00000253187
Gene ExpressionHOXA10-AS [ NCBI-GEO ]   HOXA10-AS [ EBI - ARRAY_EXPRESS ]   HOXA10-AS [ SEEK ]   HOXA10-AS [ MEM ]
Gene Expression Viewer (FireBrowse)HOXA10-AS [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100874323
GTEX Portal (Tissue expression)HOXA10-AS
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)HOXA10-AS
DMDM Disease mutations100874323
Blocks (Seattle)HOXA10-AS
Human Protein AtlasENSG00000253187
Protein Interaction databases
FunCoupENSG00000253187
BioGRIDHOXA10-AS
STRING (EMBL)HOXA10-AS
ZODIACHOXA10-AS
Ontologies - Pathways
Huge Navigator HOXA10-AS [HugePedia]
snp3D : Map Gene to Disease100874323
BioCentury BCIQHOXA10-AS
ClinGenHOXA10-AS
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100874323
Clinical trialHOXA10-AS
Miscellaneous
canSAR (ICR)HOXA10-AS (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineHOXA10-AS
EVEXHOXA10-AS
GoPubMedHOXA10-AS
iHOPHOXA10-AS
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:10:41 CEST 2017

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