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HOXA11-AS (HOXA11 antisense RNA)

Identity

Alias_namesHOXA11AS
homeobox A11 antisense
HOXA11 antisense RNA (non-protein coding)
Alias_symbol (synonym)HOXA11-AS1
HOXA11S
HOXA-AS5
NCRNA00076
Other alias
HGNC (Hugo) HOXA11-AS
LocusID (NCBI) 221883
Atlas_Id 54367
Location 7p15.2  [Link to chromosome band 7p15]
Location_base_pair Starts at 27185408 and ends at 27189293 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
HOXA11-AS (7p15.2) / CDK6 (7q21.2)KMT2A (11q23.3) / HOXA11-AS (7p15.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)HOXA11-AS   24957
Cards
Entrez_Gene (NCBI)HOXA11-AS  221883  HOXA11 antisense RNA
AliasesHOXA-AS5; HOXA11-AS1; HOXA11AS; HOXA11S; 
NCRNA00076
GeneCards (Weizmann)HOXA11-AS
Ensembl hg19 (Hinxton)ENSG00000240990 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000240990 [Gene_View]  chr7:27185408-27189293 [Contig_View]  HOXA11-AS [Vega]
ICGC DataPortalENSG00000240990
TCGA cBioPortalHOXA11-AS
AceView (NCBI)HOXA11-AS
Genatlas (Paris)HOXA11-AS
WikiGenes221883
SOURCE (Princeton)HOXA11-AS
Genetics Home Reference (NIH)HOXA11-AS
Genomic and cartography
GoldenPath hg38 (UCSC)HOXA11-AS  -     chr7:27185408-27189293 +  7p15.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)HOXA11-AS  -     7p15.2   [Description]    (hg19-Feb_2009)
EnsemblHOXA11-AS - 7p15.2 [CytoView hg19]  HOXA11-AS - 7p15.2 [CytoView hg38]
Mapping of homologs : NCBIHOXA11-AS [Mapview hg19]  HOXA11-AS [Mapview hg38]
OMIM607530   
Gene and transcription
Genbank (Entrez)BC025338 BI753022 DA421792 HG975400
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)HOXA11-AS
Cluster EST : UnigeneHs.587427 [ NCBI ]
CGAP (NCI)Hs.587427
Alternative Splicing GalleryENSG00000240990
Gene ExpressionHOXA11-AS [ NCBI-GEO ]   HOXA11-AS [ EBI - ARRAY_EXPRESS ]   HOXA11-AS [ SEEK ]   HOXA11-AS [ MEM ]
Gene Expression Viewer (FireBrowse)HOXA11-AS [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)221883
GTEX Portal (Tissue expression)HOXA11-AS
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)HOXA11-AS
DMDM Disease mutations221883
Blocks (Seattle)HOXA11-AS
Human Protein AtlasENSG00000240990
IPIIPI00843896   
Protein Interaction databases
FunCoupENSG00000240990
BioGRIDHOXA11-AS
STRING (EMBL)HOXA11-AS
ZODIACHOXA11-AS
Ontologies - Pathways
Huge Navigator HOXA11-AS [HugePedia]
snp3D : Map Gene to Disease221883
BioCentury BCIQHOXA11-AS
ClinGenHOXA11-AS
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD221883
Chemical/Pharm GKB GenePA162391589
Clinical trialHOXA11-AS
Miscellaneous
canSAR (ICR)HOXA11-AS (select the gene name)
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineHOXA11-AS
EVEXHOXA11-AS
GoPubMedHOXA11-AS
iHOPHOXA11-AS
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:55:36 CEST 2017

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