Atlas of Genetics and Cytogenetics in Oncology and Haematology

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HOXA@ (homeobox A cluster)


Alias (NCBI)HOX1@
HGNC Previous nameHOX1@
HGNC Previous namehomeo box A cluster
LocusID (NCBI) 3197
Atlas_Id 46479
Location 7p15.2  [Link to chromosome band 7p15]
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

Other Leukemias implicated (Data extracted from papers in the Atlas) [ 3 ]
  Pediatric T-Cell Acute Lymphoblastic Leukemia
t(7;14)(p15;q11) TRD/HOXA10

External links

HGNC (Hugo)HOXA@   5098
Entrez_Gene (NCBI)HOXA@    homeobox A cluster
GeneCards (Weizmann)HOXA@
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  - [Contig_View]  HOXA@ [Vega]
TCGA cBioPortalHOXA@
Genatlas (Paris)HOXA@
SOURCE (Princeton)HOXA@
Genetics Home Reference (NIH)HOXA@
Genomic and cartography
GoldenPath hg38 (UCSC)HOXA@  -  
GoldenPath hg19 (UCSC)HOXA@  -  
GoldenPathHOXA@ - [CytoView hg19]  HOXA@ - [CytoView hg38]
genome Data Viewer NCBIHOXA@ [Mapview hg19]  
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)HOXA@
Gene ExpressionHOXA@ [ NCBI-GEO ]   HOXA@ [ EBI - ARRAY_EXPRESS ]   HOXA@ [ SEEK ]   HOXA@ [ MEM ]
Gene Expression Viewer (FireBrowse)HOXA@ [ Firebrowse - Broad ]
GenevisibleExpression of HOXA@ in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)3197
GTEX Portal (Tissue expression)HOXA@
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)HOXA@
Blocks (Seattle)HOXA@
Protein Interaction databases
Ontologies - Pathways
PubMed20 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri Jan 1 18:19:04 CET 2021

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