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HOXB-AS1 (HOXB cluster antisense RNA 1)

Identity

Alias_namesHOXB cluster antisense RNA 1 (non-protein coding)
Other alias-
HGNC (Hugo) HOXB-AS1
LocusID (NCBI) 100874362
Atlas_Id 64393
Location 17q21.32  [Link to chromosome band 17q21]
Location_base_pair Starts at 48544351 and ends at 48551241 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)HOXB-AS1   43744
Cards
Entrez_Gene (NCBI)HOXB-AS1  100874362  HOXB cluster antisense RNA 1
Aliases
GeneCards (Weizmann)HOXB-AS1
Ensembl hg19 (Hinxton)ENSG00000230148 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000230148 [Gene_View]  chr17:48544351-48551241 [Contig_View]  HOXB-AS1 [Vega]
ICGC DataPortalENSG00000230148
TCGA cBioPortalHOXB-AS1
AceView (NCBI)HOXB-AS1
Genatlas (Paris)HOXB-AS1
WikiGenes100874362
SOURCE (Princeton)HOXB-AS1
Genetics Home Reference (NIH)HOXB-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)HOXB-AS1  -     chr17:48544351-48551241 +  17q21.32   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)HOXB-AS1  -     17q21.32   [Description]    (hg19-Feb_2009)
EnsemblHOXB-AS1 - 17q21.32 [CytoView hg19]  HOXB-AS1 - 17q21.32 [CytoView hg38]
Mapping of homologs : NCBIHOXB-AS1 [Mapview hg19]  HOXB-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI822042 BF875734
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)HOXB-AS1
Cluster EST : UnigeneHs.171806 [ NCBI ]
CGAP (NCI)Hs.171806
Alternative Splicing GalleryENSG00000230148
Gene ExpressionHOXB-AS1 [ NCBI-GEO ]   HOXB-AS1 [ EBI - ARRAY_EXPRESS ]   HOXB-AS1 [ SEEK ]   HOXB-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)HOXB-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100874362
GTEX Portal (Tissue expression)HOXB-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)HOXB-AS1
DMDM Disease mutations100874362
Blocks (Seattle)HOXB-AS1
Human Protein AtlasENSG00000230148
Protein Interaction databases
FunCoupENSG00000230148
BioGRIDHOXB-AS1
STRING (EMBL)HOXB-AS1
ZODIACHOXB-AS1
Ontologies - Pathways
Huge Navigator HOXB-AS1 [HugePedia]
snp3D : Map Gene to Disease100874362
BioCentury BCIQHOXB-AS1
ClinGenHOXB-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100874362
Clinical trialHOXB-AS1
Miscellaneous
canSAR (ICR)HOXB-AS1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineHOXB-AS1
EVEXHOXB-AS1
GoPubMedHOXB-AS1
iHOPHOXB-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:10:42 CEST 2017

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