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HOXC-AS2 (HOXC cluster antisense RNA 2)

Identity

Alias_namesHOXC cluster antisense RNA 2 (non-protein coding)
Other alias-
HGNC (Hugo) HOXC-AS2
LocusID (NCBI) 100874364
Atlas_Id 64400
Location 12q13.13  [Link to chromosome band 12q13]
Location_base_pair Starts at 53995208 and ends at 53996785 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)HOXC-AS2   43750
Cards
Entrez_Gene (NCBI)HOXC-AS2  100874364  HOXC cluster antisense RNA 2
Aliases
GeneCards (Weizmann)HOXC-AS2
Ensembl hg19 (Hinxton)ENSG00000250133 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000250133 [Gene_View]  chr12:53995208-53996785 [Contig_View]  HOXC-AS2 [Vega]
ICGC DataPortalENSG00000250133
TCGA cBioPortalHOXC-AS2
AceView (NCBI)HOXC-AS2
Genatlas (Paris)HOXC-AS2
WikiGenes100874364
SOURCE (Princeton)HOXC-AS2
Genetics Home Reference (NIH)HOXC-AS2
Genomic and cartography
GoldenPath hg38 (UCSC)HOXC-AS2  -     chr12:53995208-53996785 -  12q13.13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)HOXC-AS2  -     12q13.13   [Description]    (hg19-Feb_2009)
EnsemblHOXC-AS2 - 12q13.13 [CytoView hg19]  HOXC-AS2 - 12q13.13 [CytoView hg38]
Mapping of homologs : NCBIHOXC-AS2 [Mapview hg19]  HOXC-AS2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)HOXC-AS2
Cluster EST : UnigeneHs.734940 [ NCBI ]
CGAP (NCI)Hs.734940
Alternative Splicing GalleryENSG00000250133
Gene ExpressionHOXC-AS2 [ NCBI-GEO ]   HOXC-AS2 [ EBI - ARRAY_EXPRESS ]   HOXC-AS2 [ SEEK ]   HOXC-AS2 [ MEM ]
Gene Expression Viewer (FireBrowse)HOXC-AS2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100874364
GTEX Portal (Tissue expression)HOXC-AS2
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)HOXC-AS2
DMDM Disease mutations100874364
Blocks (Seattle)HOXC-AS2
Human Protein AtlasENSG00000250133
Protein Interaction databases
FunCoupENSG00000250133
BioGRIDHOXC-AS2
STRING (EMBL)HOXC-AS2
ZODIACHOXC-AS2
Ontologies - Pathways
Huge Navigator HOXC-AS2 [HugePedia]
snp3D : Map Gene to Disease100874364
BioCentury BCIQHOXC-AS2
ClinGenHOXC-AS2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100874364
Clinical trialHOXC-AS2
Miscellaneous
canSAR (ICR)HOXC-AS2 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineHOXC-AS2
EVEXHOXC-AS2
GoPubMedHOXC-AS2
iHOPHOXC-AS2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri May 19 11:16:00 CEST 2017

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