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HOXD-AS2 (HOXD cluster antisense RNA 2)

Identity

Alias_namesHOXD cluster antisense RNA 2 (non-protein coding)
Other alias-
HGNC (Hugo) HOXD-AS2
LocusID (NCBI) 100506783
Atlas_Id 64405
Location 2q31.1  [Link to chromosome band 2q31]
Location_base_pair Starts at 176134841 and ends at 176137098 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)HOXD-AS2   43756
Cards
Entrez_Gene (NCBI)HOXD-AS2  100506783  HOXD cluster antisense RNA 2
Aliases
GeneCards (Weizmann)HOXD-AS2
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr2:176134841-176137098 [Contig_View]  HOXD-AS2 [Vega]
TCGA cBioPortalHOXD-AS2
AceView (NCBI)HOXD-AS2
Genatlas (Paris)HOXD-AS2
WikiGenes100506783
SOURCE (Princeton)HOXD-AS2
Genetics Home Reference (NIH)HOXD-AS2
Genomic and cartography
GoldenPath hg38 (UCSC)HOXD-AS2  -     chr2:176134841-176137098 -  2q31.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)HOXD-AS2  -     2q31.1   [Description]    (hg19-Feb_2009)
EnsemblHOXD-AS2 - 2q31.1 [CytoView hg19]  HOXD-AS2 - 2q31.1 [CytoView hg38]
Mapping of homologs : NCBIHOXD-AS2 [Mapview hg19]  HOXD-AS2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC009347 BC034000
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)HOXD-AS2
Cluster EST : UnigeneHs.667234 [ NCBI ]
CGAP (NCI)Hs.667234
Gene ExpressionHOXD-AS2 [ NCBI-GEO ]   HOXD-AS2 [ EBI - ARRAY_EXPRESS ]   HOXD-AS2 [ SEEK ]   HOXD-AS2 [ MEM ]
Gene Expression Viewer (FireBrowse)HOXD-AS2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100506783
GTEX Portal (Tissue expression)HOXD-AS2
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)HOXD-AS2
DMDM Disease mutations100506783
Blocks (Seattle)HOXD-AS2
Protein Interaction databases
BioGRIDHOXD-AS2
STRING (EMBL)HOXD-AS2
ZODIACHOXD-AS2
Ontologies - Pathways
Huge Navigator HOXD-AS2 [HugePedia]
snp3D : Map Gene to Disease100506783
BioCentury BCIQHOXD-AS2
ClinGenHOXD-AS2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100506783
Clinical trialHOXD-AS2
Miscellaneous
canSAR (ICR)HOXD-AS2 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineHOXD-AS2
EVEXHOXD-AS2
GoPubMedHOXD-AS2
iHOPHOXD-AS2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 15:52:44 CEST 2017

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