HOXD12 (homeobox D12)

2014-11-01 Affiliation

Identity

HGNC

HOXD12

LOCATION

2q31.1

LOCUSID

3238

ALIAS

HOX4H

Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, contribute in submission tool

Other Information

Locus ID:

NCBI: 3238
MIM: 142988
HGNC: 5135
Ensembl: ENSG00000170178

Variants:

dbSNP: 3238
ClinVar: 3238
TCGA: ENSG00000170178
COSMIC: HOXD12

RNA/Proteins

Gene ID	Transcript ID	Uniprot
ENSG00000170178	ENST00000404162	B5MCD3
ENSG00000170178	ENST00000406506	P35452

Expression (GTEx)

Adipose - Subcutaneous

Adipose - Visceral

Adrenal Gland

Artery - Aorta

Artery - Tibial

Bladder

Brain - Amygdala

Brain - Anterior cingulate cortex

Brain - Caudate

Brain - Cerebellar Hemisphere

Brain - Cerebellum

Brain - Cortex

Brain - Frontal Cortex

Brain - Hippocampus

Brain - Hypothalamus

Brain - Nucleus accumbens

Brain - Putamen

Brain - Spinal cord

Brain - Substantia nigra

Breast - Mammary Tissue

Cells - Cultured fibroblasts

Cells - EBV - transformed lymphocytes

Cervix - Ectocervix

Cervix - Endocervix

Colon - Sigmoid

Colon - Transverse

Esophagus - Gastroesophageal Junction

Esophagus - Mucosa

Esophagus - Muscularis

Fallopian Tube

Heart - Atrial Appendage

Heart - Left Ventricle

Kidney - Cortex

Kidney - Medulla

Liver

Lung

Minor Salivary Gland

Muscle - Skeletal

Nerve - Tibial

Ovary

Pancreas

Pituitary

Prostate

Skin - Not Sun Exposed

Skin - Sun Exposed

Small Intestine - Terminal Ileum

Spleen

Stomach

Testis

Thyroid

Uterus

Vagina

Whole Blood

Protein levels (Protein atlas)

Not detected

Low

Medium

High

References

Pubmed ID	Year	Title	Citations
20085705	2010	A region of the human HOXD cluster that confers polycomb-group responsiveness.	144
19453261	2009	High-density association study of 383 candidate genes for volumetric BMD at the femoral neck and lumbar spine among older men.	20
19938081	2009	Altered transmission of HOX and apoptotic SNPs identify a potential common pathway for clubfoot.	14
19540081	2010	Study of HOXD genes in autism particularly regarding the ratio of second to fourth digit length.	6
19540081	2010	Study of HOXD genes in autism particularly regarding the ratio of second to fourth digit length.	6
16331564	2005	[Analysis of association between 5' HOXD gene and idiopathic congenital talipes equinovarus].	4
16331564	2005	[Analysis of association between 5' HOXD gene and idiopathic congenital talipes equinovarus].	4

Citation

Dessen P

HOXD12 (homeobox D12)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/64402/hoxd12