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HPF1 (histone PARylation factor 1)

Identity

Alias_namesC4orf27
chromosome 4 open reading frame 27
Alias_symbol (synonym)FLJ20534
Other alias
HGNC (Hugo) HPF1
LocusID (NCBI) 54969
Atlas_Id 78372
Location 4q33  [Link to chromosome band 4q33]
Location_base_pair Starts at 170650619 and ends at 170679093 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)HPF1   26051
Cards
Entrez_Gene (NCBI)HPF1  54969  histone PARylation factor 1
AliasesC4orf27
GeneCards (Weizmann)HPF1
Ensembl hg19 (Hinxton)ENSG00000056050 [Gene_View]  chr4:170650619-170679093 [Contig_View]  HPF1 [Vega]
Ensembl hg38 (Hinxton)ENSG00000056050 [Gene_View]  chr4:170650619-170679093 [Contig_View]  HPF1 [Vega]
ICGC DataPortalENSG00000056050
TCGA cBioPortalHPF1
AceView (NCBI)HPF1
Genatlas (Paris)HPF1
WikiGenes54969
SOURCE (Princeton)HPF1
Genetics Home Reference (NIH)HPF1
Genomic and cartography
GoldenPath hg19 (UCSC)HPF1  -     chr4:170650619-170679093 -  4q33   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)HPF1  -     4q33   [Description]    (hg38-Dec_2013)
EnsemblHPF1 - 4q33 [CytoView hg19]  HPF1 - 4q33 [CytoView hg38]
Mapping of homologs : NCBIHPF1 [Mapview hg19]  HPF1 [Mapview hg38]
OMIM616614   
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_017867
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)HPF1
Cluster EST : UnigeneHs.406756 [ NCBI ]
CGAP (NCI)Hs.406756
Alternative Splicing GalleryENSG00000056050
Gene ExpressionHPF1 [ NCBI-GEO ]   HPF1 [ EBI - ARRAY_EXPRESS ]   HPF1 [ SEEK ]   HPF1 [ MEM ]
Gene Expression Viewer (FireBrowse)HPF1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)54969
GTEX Portal (Tissue expression)HPF1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)HPF1
DMDM Disease mutations54969
Blocks (Seattle)HPF1
Human Protein AtlasENSG00000056050
HPRD07924
IPIIPI00016532   IPI00983006   
Protein Interaction databases
FunCoupENSG00000056050
BioGRIDHPF1
STRING (EMBL)HPF1
ZODIACHPF1
Ontologies - Pathways
Huge Navigator HPF1 [HugePedia]
snp3D : Map Gene to Disease54969
BioCentury BCIQHPF1
ClinGenHPF1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD54969
Chemical/Pharm GKB GenePA145149735
Clinical trialHPF1
Miscellaneous
canSAR (ICR)HPF1 (select the gene name)
Probes
Litterature
PubMed15 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineHPF1
EVEXHPF1
GoPubMedHPF1
iHOPHPF1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Tue Mar 14 12:08:10 CET 2017

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