Atlas of Genetics and Cytogenetics in Oncology and Haematology


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HPV18I1 (human papilloma virus (type 18) integration site 1)

Identity

Alias_namesHPV18I
D8S37
Other alias
HGNC (Hugo) HPV18I1
LocusID (NCBI) 3260
Atlas_Id 40859
Location 8q24  [Link to chromosome band 8q24]
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)HPV18I1   5166
Cards
Entrez_Gene (NCBI)HPV18I1  3260  human papilloma virus (type 18) integration site 1
AliasesD8S37; HPV18I
GeneCards (Weizmann)HPV18I1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  - [Contig_View]  HPV18I1 [Vega]
TCGA cBioPortalHPV18I1
AceView (NCBI)HPV18I1
Genatlas (Paris)HPV18I1
WikiGenes3260
SOURCE (Princeton)HPV18I1
Genetics Home Reference (NIH)HPV18I1
Genomic and cartography
GoldenPath hg38 (UCSC)HPV18I1  -  
GoldenPath hg19 (UCSC)HPV18I1  -  
EnsemblHPV18I1 - [CytoView hg19]  HPV18I1 - [CytoView hg38]
Mapping of homologs : NCBIHPV18I1 [Mapview hg19]  HPV18I1 [Mapview hg38]
OMIM167959   
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)HPV18I1
Gene ExpressionHPV18I1 [ NCBI-GEO ]   HPV18I1 [ EBI - ARRAY_EXPRESS ]   HPV18I1 [ SEEK ]   HPV18I1 [ MEM ]
Gene Expression Viewer (FireBrowse)HPV18I1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)3260
GTEX Portal (Tissue expression)HPV18I1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)HPV18I1
DMDM Disease mutations3260
Blocks (Seattle)HPV18I1
Protein Interaction databases
BioGRIDHPV18I1
STRING (EMBL)HPV18I1
ZODIACHPV18I1
Ontologies - Pathways
Huge Navigator HPV18I1 [HugePedia]
snp3D : Map Gene to Disease3260
BioCentury BCIQHPV18I1
ClinGenHPV18I1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD3260
Chemical/Pharm GKB GenePA29437
Clinical trialHPV18I1
Miscellaneous
canSAR (ICR)HPV18I1 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineHPV18I1
EVEXHPV18I1
GoPubMedHPV18I1
iHOPHPV18I1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 14:16:48 CET 2017

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