Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

HPVC1 (human papillomavirus (type 18) E5 central sequence-like 1)

Identity

Alias_symbol (synonym)PE5L
HPV18E5L
Other alias
HGNC (Hugo) HPVC1
LocusID (NCBI) 3262
Atlas_Id 40862
Location 7p11.2  [Link to chromosome band 7p11]
Location_base_pair Starts at 54268917 and ends at 54270114 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)HPVC1   5169
Cards
Entrez_Gene (NCBI)HPVC1  3262  human papillomavirus (type 18) E5 central sequence-like 1
AliasesHPV18E5L; PE5L
GeneCards (Weizmann)HPVC1
Ensembl hg19 (Hinxton) [Gene_View]  chr7:54268917-54270114 [Contig_View]  HPVC1 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr7:54268917-54270114 [Contig_View]  HPVC1 [Vega]
TCGA cBioPortalHPVC1
AceView (NCBI)HPVC1
Genatlas (Paris)HPVC1
WikiGenes3262
SOURCE (Princeton)HPVC1
Genetics Home Reference (NIH)HPVC1
Genomic and cartography
GoldenPath hg19 (UCSC)HPVC1  -     chr7:54268917-54270114 -  7p11.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)HPVC1  -     7p11.2   [Description]    (hg38-Dec_2013)
EnsemblHPVC1 - 7p11.2 [CytoView hg19]  HPVC1 - 7p11.2 [CytoView hg38]
Mapping of homologs : NCBIHPVC1 [Mapview hg19]  HPVC1 [Mapview hg38]
OMIM600762   
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000007 NC_018918 NT_007819 NW_004929330
Consensus coding sequences : CCDS (NCBI)HPVC1
Cluster EST : UnigeneHs.742598 [ NCBI ]
CGAP (NCI)Hs.742598
Gene ExpressionHPVC1 [ NCBI-GEO ]   HPVC1 [ EBI - ARRAY_EXPRESS ]   HPVC1 [ SEEK ]   HPVC1 [ MEM ]
Gene Expression Viewer (FireBrowse)HPVC1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)3262
GTEX Portal (Tissue expression)HPVC1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)HPVC1
DMDM Disease mutations3262
Blocks (Seattle)HPVC1
Protein Interaction databases
BioGRIDHPVC1
STRING (EMBL)HPVC1
ZODIACHPVC1
Ontologies - Pathways
Huge Navigator HPVC1 [HugePedia]
snp3D : Map Gene to Disease3262
BioCentury BCIQHPVC1
ClinGenHPVC1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD3262
Chemical/Pharm GKB GenePA29440
Clinical trialHPVC1
Miscellaneous
canSAR (ICR)HPVC1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineHPVC1
EVEXHPVC1
GoPubMedHPVC1
iHOPHPVC1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 13:09:44 CET 2017

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.