Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

HRASLS (HRAS like suppressor)

Identity

Alias_symbol (synonym)H-REV107
HRASLS1
Other aliasA-C1
HRSL1
HSD28
HGNC (Hugo) HRASLS
LocusID (NCBI) 57110
Atlas_Id 40863
Location 3q29  [Link to chromosome band 3q29]
Location_base_pair Starts at 193241128 and ends at 193270855 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)HRASLS   14922
Cards
Entrez_Gene (NCBI)HRASLS  57110  HRAS like suppressor
AliasesA-C1; H-REV107; HRASLS1; HRSL1; 
HSD28
GeneCards (Weizmann)HRASLS
Ensembl hg19 (Hinxton)ENSG00000127252 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000127252 [Gene_View]  chr3:193241128-193270855 [Contig_View]  HRASLS [Vega]
ICGC DataPortalENSG00000127252
TCGA cBioPortalHRASLS
AceView (NCBI)HRASLS
Genatlas (Paris)HRASLS
WikiGenes57110
SOURCE (Princeton)HRASLS
Genetics Home Reference (NIH)HRASLS
Genomic and cartography
GoldenPath hg38 (UCSC)HRASLS  -     chr3:193241128-193270855 +  3q29   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)HRASLS  -     3q29   [Description]    (hg19-Feb_2009)
EnsemblHRASLS - 3q29 [CytoView hg19]  HRASLS - 3q29 [CytoView hg38]
Mapping of homologs : NCBIHRASLS [Mapview hg19]  HRASLS [Mapview hg38]
OMIM606487   
Gene and transcription
Genbank (Entrez)AB030816 AB510981 AY251533 BC048095 BX098792
RefSeq transcript (Entrez)NM_020386
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)HRASLS
Cluster EST : UnigeneHs.36761 [ NCBI ]
CGAP (NCI)Hs.36761
Alternative Splicing GalleryENSG00000127252
Gene ExpressionHRASLS [ NCBI-GEO ]   HRASLS [ EBI - ARRAY_EXPRESS ]   HRASLS [ SEEK ]   HRASLS [ MEM ]
Gene Expression Viewer (FireBrowse)HRASLS [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)57110
GTEX Portal (Tissue expression)HRASLS
Human Protein AtlasENSG00000127252-HRASLS [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9HDD0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9HDD0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9HDD0
Splice isoforms : SwissVarQ9HDD0
Catalytic activity : Enzyme2.3.1.- [ Enzyme-Expasy ]   2.3.1.-2.3.1.- [ IntEnz-EBI ]   2.3.1.- [ BRENDA ]   2.3.1.- [ KEGG ]   
PhosPhoSitePlusQ9HDD0
Domains : Interpro (EBI)LRAT-like_dom   
Domain families : Pfam (Sanger)LRAT (PF04970)   
Domain families : Pfam (NCBI)pfam04970   
Conserved Domain (NCBI)HRASLS
DMDM Disease mutations57110
Blocks (Seattle)HRASLS
SuperfamilyQ9HDD0
Human Protein Atlas [tissue]ENSG00000127252-HRASLS [tissue]
Peptide AtlasQ9HDD0
HPRD07577
IPIIPI00925994   IPI00925760   
Protein Interaction databases
DIP (DOE-UCLA)Q9HDD0
IntAct (EBI)Q9HDD0
FunCoupENSG00000127252
BioGRIDHRASLS
STRING (EMBL)HRASLS
ZODIACHRASLS
Ontologies - Pathways
QuickGOQ9HDD0
Ontology : AmiGOintegral component of membrane  lipid catabolic process  transferase activity  hydrolase activity  
Ontology : EGO-EBIintegral component of membrane  lipid catabolic process  transferase activity  hydrolase activity  
NDEx NetworkHRASLS
Atlas of Cancer Signalling NetworkHRASLS
Wikipedia pathwaysHRASLS
Orthology - Evolution
OrthoDB57110
GeneTree (enSembl)ENSG00000127252
Phylogenetic Trees/Animal Genes : TreeFamHRASLS
HOVERGENQ9HDD0
HOGENOMQ9HDD0
Homologs : HomoloGeneHRASLS
Homology/Alignments : Family Browser (UCSC)HRASLS
Gene fusions - Rearrangements
Tumor Fusion PortalHRASLS
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerHRASLS [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)HRASLS
dbVarHRASLS
ClinVarHRASLS
1000_GenomesHRASLS 
Exome Variant ServerHRASLS
ExAC (Exome Aggregation Consortium)ENSG00000127252
GNOMAD BrowserENSG00000127252
Genetic variants : HAPMAP57110
Genomic Variants (DGV)HRASLS [DGVbeta]
DECIPHERHRASLS [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisHRASLS 
Mutations
ICGC Data PortalHRASLS 
TCGA Data PortalHRASLS 
Broad Tumor PortalHRASLS
OASIS PortalHRASLS [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICHRASLS  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDHRASLS
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
BioMutasearch HRASLS
DgiDB (Drug Gene Interaction Database)HRASLS
DoCM (Curated mutations)HRASLS (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)HRASLS (select a term)
intoGenHRASLS
Cancer3DHRASLS(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM606487   
Orphanet
DisGeNETHRASLS
MedgenHRASLS
Genetic Testing Registry HRASLS
NextProtQ9HDD0 [Medical]
TSGene57110
GENETestsHRASLS
Target ValidationHRASLS
Huge Navigator HRASLS [HugePedia]
snp3D : Map Gene to Disease57110
BioCentury BCIQHRASLS
ClinGenHRASLS
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD57110
Chemical/Pharm GKB GenePA29445
Clinical trialHRASLS
Miscellaneous
canSAR (ICR)HRASLS (select the gene name)
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineHRASLS
EVEXHRASLS
GoPubMedHRASLS
iHOPHRASLS
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 14:16:50 CET 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.