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HRAT13 (heart tissue-associated transcript 13)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 101927990
Atlas_Id 67261
Location 6q22.31  [Link to chromosome band 6q22]
Location_base_pair Starts at 123439604 and ends at 123471756 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)HRAT13  101927990  heart tissue-associated transcript 13
Aliases
GeneCards (Weizmann)HRAT13
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr6:123439604-123471756 [Contig_View]  HRAT13 [Vega]
TCGA cBioPortalHRAT13
AceView (NCBI)HRAT13
Genatlas (Paris)HRAT13
WikiGenes101927990
SOURCE (Princeton)HRAT13
Genetics Home Reference (NIH)HRAT13
Genomic and cartography
GoldenPath hg38 (UCSC)HRAT13  -     chr6:123439604-123471756 +  6q22.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)HRAT13  -     6q22.31   [Description]    (hg19-Feb_2009)
EnsemblHRAT13 - 6q22.31 [CytoView hg19]  HRAT13 - 6q22.31 [CytoView hg38]
Mapping of homologs : NCBIHRAT13 [Mapview hg19]  HRAT13 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AL832096
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)HRAT13
Cluster EST : UnigeneHs.660877 [ NCBI ]
CGAP (NCI)Hs.660877
Gene ExpressionHRAT13 [ NCBI-GEO ]   HRAT13 [ EBI - ARRAY_EXPRESS ]   HRAT13 [ SEEK ]   HRAT13 [ MEM ]
Gene Expression Viewer (FireBrowse)HRAT13 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101927990
GTEX Portal (Tissue expression)HRAT13
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)HRAT13
DMDM Disease mutations101927990
Blocks (Seattle)HRAT13
Protein Interaction databases
BioGRIDHRAT13
STRING (EMBL)HRAT13
ZODIACHRAT13
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease101927990
BioCentury BCIQHRAT13
ClinGenHRAT13
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101927990
Clinical trialHRAT13
Miscellaneous
canSAR (ICR)HRAT13 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineHRAT13
EVEXHRAT13
GoPubMedHRAT13
iHOPHRAT13
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 13:49:19 CEST 2018

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