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HRAT56 (heart tissue-associated transcript 56)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 101927280
Atlas_Id 67099
Location 5q23.1  [Link to chromosome band 5q23]
Location_base_pair Starts at 117686667 and ends at 117897812 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)HRAT56  101927280  heart tissue-associated transcript 56
Aliases
GeneCards (Weizmann)HRAT56
Ensembl hg19 (Hinxton) [Gene_View]  chr5:117686667-117897812 [Contig_View]  HRAT56 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr5:117686667-117897812 [Contig_View]  HRAT56 [Vega]
TCGA cBioPortalHRAT56
AceView (NCBI)HRAT56
Genatlas (Paris)HRAT56
WikiGenes101927280
SOURCE (Princeton)HRAT56
Genetics Home Reference (NIH)HRAT56
Genomic and cartography
GoldenPath hg19 (UCSC)HRAT56  -     chr5:117686667-117897812 -  5q23.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)HRAT56  -     5q23.1   [Description]    (hg38-Dec_2013)
EnsemblHRAT56 - 5q23.1 [CytoView hg19]  HRAT56 - 5q23.1 [CytoView hg38]
Mapping of homologs : NCBIHRAT56 [Mapview hg19]  HRAT56 [Mapview hg38]
Gene and transcription
Genbank (Entrez)CR627150 HG498381 HG498382
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000005 NC_018916 NT_034772 NW_004929323
Consensus coding sequences : CCDS (NCBI)HRAT56
Cluster EST : UnigeneHs.543951 [ NCBI ]
CGAP (NCI)Hs.543951
Gene ExpressionHRAT56 [ NCBI-GEO ]   HRAT56 [ EBI - ARRAY_EXPRESS ]   HRAT56 [ SEEK ]   HRAT56 [ MEM ]
Gene Expression Viewer (FireBrowse)HRAT56 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101927280
GTEX Portal (Tissue expression)HRAT56
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)HRAT56
DMDM Disease mutations101927280
Blocks (Seattle)HRAT56
Protein Interaction databases
BioGRIDHRAT56
STRING (EMBL)HRAT56
ZODIACHRAT56
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease101927280
BioCentury BCIQHRAT56
ClinGenHRAT56
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101927280
Clinical trialHRAT56
Miscellaneous
canSAR (ICR)HRAT56 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineHRAT56
EVEXHRAT56
GoPubMedHRAT56
iHOPHRAT56
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:08:12 CET 2017

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