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HRAT92 (heart tissue-associated transcript 92)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 441307
Atlas_Id 63513
Location 7p22.3  [Link to chromosome band 7p22]
Location_base_pair Starts at 520391 and ends at 525232 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)HRAT92  441307  heart tissue-associated transcript 92
Aliases
GeneCards (Weizmann)HRAT92
Ensembl hg19 (Hinxton)ENSG00000223855 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000223855 [Gene_View]  chr7:520391-525232 [Contig_View]  HRAT92 [Vega]
ICGC DataPortalENSG00000223855
TCGA cBioPortalHRAT92
AceView (NCBI)HRAT92
Genatlas (Paris)HRAT92
WikiGenes441307
SOURCE (Princeton)HRAT92
Genetics Home Reference (NIH)HRAT92
Genomic and cartography
GoldenPath hg38 (UCSC)HRAT92  -     chr7:520391-525232 +  7p22.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)HRAT92  -     7p22.3   [Description]    (hg19-Feb_2009)
EnsemblHRAT92 - 7p22.3 [CytoView hg19]  HRAT92 - 7p22.3 [CytoView hg38]
Mapping of homologs : NCBIHRAT92 [Mapview hg19]  HRAT92 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK126475
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)HRAT92
Cluster EST : UnigeneHs.521334 [ NCBI ]
CGAP (NCI)Hs.521334
Alternative Splicing GalleryENSG00000223855
Gene ExpressionHRAT92 [ NCBI-GEO ]   HRAT92 [ EBI - ARRAY_EXPRESS ]   HRAT92 [ SEEK ]   HRAT92 [ MEM ]
Gene Expression Viewer (FireBrowse)HRAT92 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)441307
GTEX Portal (Tissue expression)HRAT92
Human Protein AtlasENSG00000223855-HRAT92 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)HRAT92
DMDM Disease mutations441307
Blocks (Seattle)HRAT92
Human Protein Atlas [tissue]ENSG00000223855-HRAT92 [tissue]
IPIIPI00745512   
Protein Interaction databases
FunCoupENSG00000223855
BioGRIDHRAT92
STRING (EMBL)HRAT92
ZODIACHRAT92
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease441307
BioCentury BCIQHRAT92
ClinGenHRAT92
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD441307
Clinical trialHRAT92
Miscellaneous
canSAR (ICR)HRAT92 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineHRAT92
EVEXHRAT92
GoPubMedHRAT92
iHOPHRAT92
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 11:50:58 CET 2017

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