Atlas of Genetics and Cytogenetics in Oncology and Haematology


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HS6ST2-AS1 (HS6ST2 antisense RNA 1)

Identity

Alias_namesHS6ST2 antisense RNA 1 (non-protein coding)
Other alias-
HGNC (Hugo) HS6ST2-AS1
LocusID (NCBI) 100874102
Atlas_Id 64432
Location Xq26.2  [Link to chromosome band Xq26]
Location_base_pair Starts at 131801670 and ends at 131803915 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)HS6ST2-AS1   40870
Cards
Entrez_Gene (NCBI)HS6ST2-AS1  100874102  HS6ST2 antisense RNA 1
Aliases
GeneCards (Weizmann)HS6ST2-AS1
Ensembl hg19 (Hinxton)ENSG00000235849 [Gene_View]  chrX:131801670-131803915 [Contig_View]  HS6ST2-AS1 [Vega]
Ensembl hg38 (Hinxton)ENSG00000235849 [Gene_View]  chrX:131801670-131803915 [Contig_View]  HS6ST2-AS1 [Vega]
ICGC DataPortalENSG00000235849
TCGA cBioPortalHS6ST2-AS1
AceView (NCBI)HS6ST2-AS1
Genatlas (Paris)HS6ST2-AS1
WikiGenes100874102
SOURCE (Princeton)HS6ST2-AS1
Genetics Home Reference (NIH)HS6ST2-AS1
Genomic and cartography
GoldenPath hg19 (UCSC)HS6ST2-AS1  -     chrX:131801670-131803915 +  Xq26.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)HS6ST2-AS1  -     Xq26.2   [Description]    (hg38-Dec_2013)
EnsemblHS6ST2-AS1 - Xq26.2 [CytoView hg19]  HS6ST2-AS1 - Xq26.2 [CytoView hg38]
Mapping of homologs : NCBIHS6ST2-AS1 [Mapview hg19]  HS6ST2-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BQ001311 HG512689
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000023 NC_018934 NT_011786 NW_004929446
Consensus coding sequences : CCDS (NCBI)HS6ST2-AS1
Cluster EST : UnigeneHs.619341 [ NCBI ]
CGAP (NCI)Hs.619341
Alternative Splicing GalleryENSG00000235849
Gene ExpressionHS6ST2-AS1 [ NCBI-GEO ]   HS6ST2-AS1 [ EBI - ARRAY_EXPRESS ]   HS6ST2-AS1 [ SEEK ]   HS6ST2-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)HS6ST2-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100874102
GTEX Portal (Tissue expression)HS6ST2-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)HS6ST2-AS1
DMDM Disease mutations100874102
Blocks (Seattle)HS6ST2-AS1
Human Protein AtlasENSG00000235849
Protein Interaction databases
FunCoupENSG00000235849
BioGRIDHS6ST2-AS1
STRING (EMBL)HS6ST2-AS1
ZODIACHS6ST2-AS1
Ontologies - Pathways
Huge Navigator HS6ST2-AS1 [HugePedia]
snp3D : Map Gene to Disease100874102
BioCentury BCIQHS6ST2-AS1
ClinGenHS6ST2-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100874102
Clinical trialHS6ST2-AS1
Miscellaneous
canSAR (ICR)HS6ST2-AS1 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineHS6ST2-AS1
EVEXHS6ST2-AS1
GoPubMedHS6ST2-AS1
iHOPHS6ST2-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:08:14 CET 2017

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