| Nomenclature |
HGNC (Hugo) | HSF5 26862 |
| Cards |
Entrez_Gene (NCBI) | HSF5 124535 heat shock transcription factor 5 |
Aliases | HSF; HSTF |
GeneCards (Weizmann) | HSF5 |
Ensembl hg19 (Hinxton) | ENSG00000176160 [Gene_View] |
Ensembl hg38 (Hinxton) | ENSG00000176160 [Gene_View] chr17:58420167-58488401 [Contig_View] HSF5 [Vega] |
ICGC DataPortal | ENSG00000176160 |
TCGA cBioPortal | HSF5 |
AceView (NCBI) | HSF5 |
Genatlas (Paris) | HSF5 |
WikiGenes | 124535 |
SOURCE (Princeton) | HSF5 |
Genetics Home Reference (NIH) | HSF5 |
| Genomic and cartography |
GoldenPath hg38 (UCSC) | HSF5 - chr17:58420167-58488401 - 17q22 [Description] (hg38-Dec_2013) |
GoldenPath hg19 (UCSC) | HSF5 - 17q22 [Description] (hg19-Feb_2009) |
Ensembl | HSF5 - 17q22 [CytoView hg19] HSF5 - 17q22 [CytoView hg38] |
Mapping of homologs : NCBI | HSF5 [Mapview hg19] HSF5 [Mapview hg38] |
| Gene and transcription |
Genbank (Entrez) | AL137385 BC033017 BC033020 BC115385 BC115386 |
RefSeq transcript (Entrez) | NM_001080439 |
RefSeq genomic (Entrez) | |
Consensus coding sequences : CCDS (NCBI) | HSF5 |
Cluster EST : Unigene | Hs.380061 [ NCBI ] |
CGAP (NCI) | Hs.380061 |
Alternative Splicing Gallery | ENSG00000176160 |
Gene Expression | HSF5 [ NCBI-GEO ] HSF5 [ EBI - ARRAY_EXPRESS ]
HSF5 [ SEEK ] HSF5 [ MEM ] |
Gene Expression Viewer (FireBrowse) | HSF5 [ Firebrowse - Broad ] |
SOURCE (Princeton) | Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60] |
Genevestigator | Expression in : [tissues]  [cell-lines]  [cancer]  [perturbations]   |
BioGPS (Tissue expression) | 124535 |
GTEX Portal (Tissue expression) | HSF5 |
Human Protein Atlas | ENSG00000176160-HSF5 [pathology] [cell] [tissue] |
| Protein : pattern, domain, 3D structure |
UniProt/SwissProt | Q4G112 [function] [subcellular_location] [family_and_domains] [pathology_and_biotech] [ptm_processing] [expression] [interaction] |
NextProt | Q4G112 [Sequence] [Exons] [Medical] [Publications] |
With graphics : InterPro | Q4G112 |
Splice isoforms : SwissVar | Q4G112 |
PhosPhoSitePlus | Q4G112 |
Domains : Interpro (EBI) | HSF5 HSF_DNA-bd HSF_fam WHTH_DNA-bd_dom |
Domain families : Pfam (Sanger) | HSF_DNA-bind (PF00447) |
Domain families : Pfam (NCBI) | pfam00447 |
Domain families : Smart (EMBL) | HSF (SM00415) |
Conserved Domain (NCBI) | HSF5 |
DMDM Disease mutations | 124535 |
Blocks (Seattle) | HSF5 |
Superfamily | Q4G112 |
Human Protein Atlas [tissue] | ENSG00000176160-HSF5 [tissue] |
Peptide Atlas | Q4G112 |
IPI | IPI00297953 IPI00983044 |
| Protein Interaction databases |
DIP (DOE-UCLA) | Q4G112 |
IntAct (EBI) | Q4G112 |
FunCoup | ENSG00000176160 |
BioGRID | HSF5 |
STRING (EMBL) | HSF5 |
ZODIAC | HSF5 |
| Ontologies - Pathways |
QuickGO | Q4G112 |
Ontology : AmiGO | transcription factor activity, sequence-specific DNA binding nucleus transcription, DNA-templated regulation of transcription, DNA-templated sequence-specific DNA binding |
Ontology : EGO-EBI | transcription factor activity, sequence-specific DNA binding nucleus transcription, DNA-templated regulation of transcription, DNA-templated sequence-specific DNA binding |
NDEx Network | HSF5 |
Atlas of Cancer Signalling Network | HSF5 |
Wikipedia pathways | HSF5 |
| Orthology - Evolution |
OrthoDB | 124535 |
GeneTree (enSembl) | ENSG00000176160 |
Phylogenetic Trees/Animal Genes : TreeFam | HSF5 |
HOVERGEN | Q4G112 |
HOGENOM | Q4G112 |
Homologs : HomoloGene | HSF5 |
Homology/Alignments : Family Browser (UCSC) | HSF5 |
| Gene fusions - Rearrangements |
Fusion : Quiver | HSF5 |
| Polymorphisms : SNP and Copy number variants |
NCBI Variation Viewer | HSF5 [hg38] |
dbSNP Single Nucleotide Polymorphism (NCBI) | HSF5 |
dbVar | HSF5 |
ClinVar | HSF5 |
1000_Genomes | HSF5 |
Exome Variant Server | HSF5 |
ExAC (Exome Aggregation Consortium) | ENSG00000176160 |
GNOMAD Browser | ENSG00000176160 |
Genetic variants : HAPMAP | 124535 |
Genomic Variants (DGV) | HSF5 [DGVbeta] |
DECIPHER | HSF5 [patients] [syndromes] [variants] [genes] |
CONAN: Copy Number Analysis | HSF5 |
| Mutations |
ICGC Data Portal | HSF5 |
TCGA Data Portal | HSF5 |
Broad Tumor Portal | HSF5 |
OASIS Portal | HSF5 [ Somatic mutations - Copy number] |
Somatic Mutations in Cancer : COSMIC | HSF5 [overview] [genome browser] [tissue] [distribution] |
Mutations and Diseases : HGMD | HSF5 |
LOVD (Leiden Open Variation Database) | Whole genome datasets |
LOVD (Leiden Open Variation Database) | LOVD - Leiden Open Variation Database |
LOVD (Leiden Open Variation Database) | LOVD 3.0 shared installation |
BioMuta | search HSF5 |
DgiDB (Drug Gene Interaction Database) | HSF5 |
DoCM (Curated mutations) | HSF5 (select the gene name) |
CIViC (Clinical Interpretations of Variants in Cancer) | HSF5 (select a term) |
intoGen | HSF5 |
Cancer3D | HSF5(select the gene name) |
Impact of mutations | [PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser] |
| Diseases |
---|
OMIM | |
Orphanet | |
DisGeNET | HSF5 |
Medgen | HSF5 |
Genetic Testing Registry | HSF5
|
NextProt | Q4G112 [Medical] |
TSGene | 124535 |
GENETests | HSF5 |
Target Validation | HSF5 |
Huge Navigator |
HSF5 [HugePedia] |
snp3D : Map Gene to Disease | 124535 |
BioCentury BCIQ | HSF5 |
ClinGen | HSF5 |
| Clinical trials, drugs, therapy |
---|
Chemical/Protein Interactions : CTD | 124535 |
Chemical/Pharm GKB Gene | PA145008204 |
Clinical trial | HSF5 |
| Miscellaneous |
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canSAR (ICR) | HSF5 (select the gene name) |
| Probes |
---|
| Litterature |
---|
PubMed | 3 Pubmed reference(s) in Entrez |
GeneRIFs | Gene References Into Functions (Entrez) |
CoreMine | HSF5 |
EVEX | HSF5 |
GoPubMed | HSF5 |
iHOP | HSF5 |