| Nomenclature |
|---|
| HGNC (Hugo) | HSF5 26862 |
| Cards |
|---|
| Entrez_Gene (NCBI) | HSF5 124535 heat shock transcription factor 5 |
| Aliases | HSF; HSTF |
| GeneCards (Weizmann) | HSF5 |
| Ensembl hg19 (Hinxton) | ENSG00000176160 [Gene_View] |
| Ensembl hg38 (Hinxton) | ENSG00000176160 [Gene_View] ENSG00000176160 [Sequence] chr17:58420167-58488401 [Contig_View] HSF5 [Vega] |
| ICGC DataPortal | ENSG00000176160 |
| TCGA cBioPortal | HSF5 |
| AceView (NCBI) | HSF5 |
| Genatlas (Paris) | HSF5 |
| WikiGenes | 124535 |
| SOURCE (Princeton) | HSF5 |
| Genetics Home Reference (NIH) | HSF5 |
| Genomic and cartography |
|---|
| GoldenPath hg38 (UCSC) | HSF5 - chr17:58420167-58488401 - 17q22 [Description] (hg38-Dec_2013) |
| GoldenPath hg19 (UCSC) | HSF5 - 17q22 [Description] (hg19-Feb_2009) |
| Ensembl | HSF5 - 17q22 [CytoView hg19] HSF5 - 17q22 [CytoView hg38] |
| Mapping of homologs : NCBI | HSF5 [Mapview hg19] HSF5 [Mapview hg38] |
| Gene and transcription |
|---|
| Genbank (Entrez) | AL137385 BC033017 BC033020 BC115385 BC115386 |
| RefSeq transcript (Entrez) | NM_001080439 |
| RefSeq genomic (Entrez) | |
| Consensus coding sequences : CCDS (NCBI) | HSF5 |
| Cluster EST : Unigene | Hs.380061 [ NCBI ] |
| CGAP (NCI) | Hs.380061 |
| Alternative Splicing Gallery | ENSG00000176160 |
| Gene Expression | HSF5 [ NCBI-GEO ] HSF5 [ EBI - ARRAY_EXPRESS ]
HSF5 [ SEEK ] HSF5 [ MEM ] |
| Gene Expression Viewer (FireBrowse) | HSF5 [ Firebrowse - Broad ] |
| SOURCE (Princeton) | Expression in : [Datasets] [Normal Tissue Atlas] [carcinoma Classsification] [NCI60] |
| Genevestigator | Expression in : [tissues] [cell-lines] [cancer] [perturbations] |
| BioGPS (Tissue expression) | 124535 |
| GTEX Portal (Tissue expression) | HSF5 |
| Human Protein Atlas | ENSG00000176160-HSF5 [pathology] [cell] [tissue] |
| Protein : pattern, domain, 3D structure |
|---|
| UniProt/SwissProt | Q4G112 [function] [subcellular_location] [family_and_domains] [pathology_and_biotech] [ptm_processing] [expression] [interaction] |
| NextProt | Q4G112 [Sequence] [Exons] [Medical] [Publications] |
| With graphics : InterPro | Q4G112 |
| Splice isoforms : SwissVar | Q4G112 |
| PhosPhoSitePlus | Q4G112 |
| Domains : Interpro (EBI) | HSF5 HSF_DNA-bd HSF_fam WHTH_DNA-bd_dom |
| Domain families : Pfam (Sanger) | HSF_DNA-bind (PF00447) |
| Domain families : Pfam (NCBI) | pfam00447 |
| Domain families : Smart (EMBL) | HSF (SM00415) |
| Conserved Domain (NCBI) | HSF5 |
| DMDM Disease mutations | 124535 |
| Blocks (Seattle) | HSF5 |
| Superfamily | Q4G112 |
| Human Protein Atlas [tissue] | ENSG00000176160-HSF5 [tissue] |
| Peptide Atlas | Q4G112 |
| IPI | IPI00297953 IPI00983044 |
| Protein Interaction databases |
|---|
| DIP (DOE-UCLA) | Q4G112 |
| IntAct (EBI) | Q4G112 |
| FunCoup | ENSG00000176160 |
| BioGRID | HSF5 |
| STRING (EMBL) | HSF5 |
| ZODIAC | HSF5 |
| Ontologies - Pathways |
|---|
| QuickGO | Q4G112 |
| Ontology : AmiGO | transcription factor activity, sequence-specific DNA binding nucleus transcription, DNA-templated regulation of transcription, DNA-templated sequence-specific DNA binding |
| Ontology : EGO-EBI | transcription factor activity, sequence-specific DNA binding nucleus transcription, DNA-templated regulation of transcription, DNA-templated sequence-specific DNA binding |
| NDEx Network | HSF5 |
| Atlas of Cancer Signalling Network | HSF5 |
| Wikipedia pathways | HSF5 |
| Orthology - Evolution |
|---|
| OrthoDB | 124535 |
| GeneTree (enSembl) | ENSG00000176160 |
| Phylogenetic Trees/Animal Genes : TreeFam | HSF5 |
| HOVERGEN | Q4G112 |
| HOGENOM | Q4G112 |
| Homologs : HomoloGene | HSF5 |
| Homology/Alignments : Family Browser (UCSC) | HSF5 |
| Gene fusions - Rearrangements |
|---|
| Fusion : Quiver | HSF5 |
| Polymorphisms : SNP and Copy number variants |
|---|
| NCBI Variation Viewer | HSF5 [hg38] |
| dbSNP Single Nucleotide Polymorphism (NCBI) | HSF5 |
| dbVar | HSF5 |
| ClinVar | HSF5 |
| 1000_Genomes | HSF5 |
| Exome Variant Server | HSF5 |
| ExAC (Exome Aggregation Consortium) | ENSG00000176160 |
| GNOMAD Browser | ENSG00000176160 |
| Varsome Browser | HSF5 |
| Genetic variants : HAPMAP | 124535 |
| Genomic Variants (DGV) | HSF5 [DGVbeta] |
| DECIPHER | HSF5 [patients] [syndromes] [variants] [genes] |
| CONAN: Copy Number Analysis | HSF5 |
| Mutations |
|---|
| ICGC Data Portal | HSF5 |
| TCGA Data Portal | HSF5 |
| Broad Tumor Portal | HSF5 |
| OASIS Portal | HSF5 [ Somatic mutations - Copy number] |
| Somatic Mutations in Cancer : COSMIC | HSF5 [overview] [genome browser] [tissue] [distribution] |
| Mutations and Diseases : HGMD | HSF5 |
| LOVD (Leiden Open Variation Database) | Whole genome datasets |
| LOVD (Leiden Open Variation Database) | LOVD - Leiden Open Variation Database |
| LOVD (Leiden Open Variation Database) | LOVD 3.0 shared installation |
| BioMuta | search HSF5 |
| DgiDB (Drug Gene Interaction Database) | HSF5 |
| DoCM (Curated mutations) | HSF5 (select the gene name) |
| CIViC (Clinical Interpretations of Variants in Cancer) | HSF5 (select a term) |
| intoGen | HSF5 |
| Cancer3D | HSF5(select the gene name) |
| Impact of mutations | [PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser] |
| Diseases |
|---|
| OMIM | |
| Orphanet | |
| DisGeNET | HSF5 |
| Medgen | HSF5 |
| Genetic Testing Registry | HSF5
|
| NextProt | Q4G112 [Medical] |
| TSGene | 124535 |
| GENETests | HSF5 |
| Target Validation | HSF5 |
| Huge Navigator |
HSF5 [HugePedia] |
| snp3D : Map Gene to Disease | 124535 |
| BioCentury BCIQ | HSF5 |
| ClinGen | HSF5 |
| Clinical trials, drugs, therapy |
|---|
| Chemical/Protein Interactions : CTD | 124535 |
| Chemical/Pharm GKB Gene | PA145008204 |
| Clinical trial | HSF5 |
| Miscellaneous |
|---|
| canSAR (ICR) | HSF5 (select the gene name) |
| Probes |
|---|
| Litterature |
|---|
| PubMed | 3 Pubmed reference(s) in Entrez |
| GeneRIFs | Gene References Into Functions (Entrez) |
| CoreMine | HSF5 |
| EVEX | HSF5 |
| GoPubMed | HSF5 |
| iHOP | HSF5 |
