Atlas of Genetics and Cytogenetics in Oncology and Haematology


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HSFY1P1 (heat shock transcription factor, Y-linked 1 pseudogene 1)

Identity

Alias_namesCECR8
cat eye syndrome chromosome region, candidate 8
cat eye syndrome chromosome region, candidate 8 (non-protein coding)
Alias_symbol (synonym)HSFYP1
HSFYL1
Other aliasNCRNA00016
HGNC (Hugo) HSFY1P1
LocusID (NCBI) 27437
Atlas_Id 64448
Location 22q11.1  [Link to chromosome band 22q11]
Location_base_pair Starts at 16827474 and ends at 16829335 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)HSFY1P1   1846
Cards
Entrez_Gene (NCBI)HSFY1P1  27437  heat shock transcription factor, Y-linked 1 pseudogene 1
AliasesCECR8; HSFYL1; HSFYP1; NCRNA00016
GeneCards (Weizmann)HSFY1P1
Ensembl hg19 (Hinxton)ENSG00000229027 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000229027 [Gene_View]  chr22:16827474-16829335 [Contig_View]  HSFY1P1 [Vega]
ICGC DataPortalENSG00000229027
TCGA cBioPortalHSFY1P1
AceView (NCBI)HSFY1P1
Genatlas (Paris)HSFY1P1
WikiGenes27437
SOURCE (Princeton)HSFY1P1
Genetics Home Reference (NIH)HSFY1P1
Genomic and cartography
GoldenPath hg38 (UCSC)HSFY1P1  -     chr22:16827474-16829335 +  22q11.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)HSFY1P1  -     22q11.1   [Description]    (hg19-Feb_2009)
EnsemblHSFY1P1 - 22q11.1 [CytoView hg19]  HSFY1P1 - 22q11.1 [CytoView hg38]
Mapping of homologs : NCBIHSFY1P1 [Mapview hg19]  HSFY1P1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AY026053
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)HSFY1P1
Cluster EST : UnigeneHs.143955 [ NCBI ]
CGAP (NCI)Hs.143955
Alternative Splicing GalleryENSG00000229027
Gene ExpressionHSFY1P1 [ NCBI-GEO ]   HSFY1P1 [ EBI - ARRAY_EXPRESS ]   HSFY1P1 [ SEEK ]   HSFY1P1 [ MEM ]
Gene Expression Viewer (FireBrowse)HSFY1P1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)27437
GTEX Portal (Tissue expression)HSFY1P1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)HSFY1P1
DMDM Disease mutations27437
Blocks (Seattle)HSFY1P1
Human Protein AtlasENSG00000229027
IPIIPI00868731   
Protein Interaction databases
FunCoupENSG00000229027
BioGRIDHSFY1P1
STRING (EMBL)HSFY1P1
ZODIACHSFY1P1
Ontologies - Pathways
Huge Navigator HSFY1P1 [HugePedia]
snp3D : Map Gene to Disease27437
BioCentury BCIQHSFY1P1
ClinGenHSFY1P1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD27437
Chemical/Pharm GKB GenePA26389
Clinical trialHSFY1P1
Miscellaneous
canSAR (ICR)HSFY1P1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineHSFY1P1
EVEXHSFY1P1
GoPubMedHSFY1P1
iHOPHSFY1P1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:10:50 CEST 2017

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