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HSP90AA2P (heat shock protein 90kDa alpha family class A member 2, pseudogene)

Identity

Alias_namesHSPCAL3
HSP90AA2
heat shock 90kD protein 1, alpha-like 3
heat shock 90kDa protein 1, alpha-like 3
heat shock protein 90kDa alpha (cytosolic), class A member 2
heat shock protein 90kDa alpha (cytosolic), class A member 2, pseudogene
Alias_symbol (synonym)HSPCA
HSP90ALPHA
Other alias
HGNC (Hugo) HSP90AA2P
LocusID (NCBI) 3324
Atlas_Id 54918
Location 11p14.1  [Link to chromosome band 11p14]
Location_base_pair Starts at 27911648 and ends at 27912921 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
HSP90AA2P (11p14.1) / BCL6 (3q27.3)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)HSP90AA2P   5256
Cards
Entrez_Gene (NCBI)HSP90AA2P  3324  heat shock protein 90kDa alpha family class A member 2, pseudogene
AliasesHSP90AA2; HSP90ALPHA; HSPCA; HSPCAL3
GeneCards (Weizmann)HSP90AA2P
Ensembl hg19 (Hinxton) [Gene_View]  chr11:27911648-27912921 [Contig_View]  HSP90AA2P [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr11:27911648-27912921 [Contig_View]  HSP90AA2P [Vega]
TCGA cBioPortalHSP90AA2P
AceView (NCBI)HSP90AA2P
Genatlas (Paris)HSP90AA2P
WikiGenes3324
SOURCE (Princeton)HSP90AA2P
Genetics Home Reference (NIH)HSP90AA2P
Genomic and cartography
GoldenPath hg19 (UCSC)HSP90AA2P  -     chr11:27911648-27912921 -  11p14.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)HSP90AA2P  -     11p14.1   [Description]    (hg38-Dec_2013)
EnsemblHSP90AA2P - 11p14.1 [CytoView hg19]  HSP90AA2P - 11p14.1 [CytoView hg38]
Mapping of homologs : NCBIHSP90AA2P [Mapview hg19]  HSP90AA2P [Mapview hg38]
OMIM140575   
Gene and transcription
Genbank (Entrez)M30627
RefSeq transcript (Entrez)NM_001040141
RefSeq genomic (Entrez)NC_000011 NC_018922 NG_005856 NT_009237 NW_004929378
Consensus coding sequences : CCDS (NCBI)HSP90AA2P
Cluster EST : UnigeneHs.523560 [ NCBI ]
CGAP (NCI)Hs.523560
Gene ExpressionHSP90AA2P [ NCBI-GEO ]   HSP90AA2P [ EBI - ARRAY_EXPRESS ]   HSP90AA2P [ SEEK ]   HSP90AA2P [ MEM ]
Gene Expression Viewer (FireBrowse)HSP90AA2P [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)3324
GTEX Portal (Tissue expression)HSP90AA2P
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ14568   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ14568  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ14568
Splice isoforms : SwissVarQ14568
PhosPhoSitePlusQ14568
Domaine pattern : Prosite (Expaxy)HSP90 (PS00298)   
Domains : Interpro (EBI)HATPase_C    Heat_shock_protein_90_CS    Hsp90_fam    Hsp90_N    Ribosomal_S5_D2-typ_fold   
Domain families : Pfam (Sanger)HATPase_c (PF02518)    HSP90 (PF00183)   
Domain families : Pfam (NCBI)pfam02518    pfam00183   
Domain families : Smart (EMBL)HATPase_c (SM00387)  
Conserved Domain (NCBI)HSP90AA2P
DMDM Disease mutations3324
Blocks (Seattle)HSP90AA2P
SuperfamilyQ14568
Peptide AtlasQ14568
IPIIPI00031523   
Protein Interaction databases
DIP (DOE-UCLA)Q14568
IntAct (EBI)Q14568
BioGRIDHSP90AA2P
STRING (EMBL)HSP90AA2P
ZODIACHSP90AA2P
Ontologies - Pathways
QuickGOQ14568
Ontology : AmiGOmolecular_function  ATP binding  cytoplasm  protein folding  response to stress  biological_process  unfolded protein binding  extracellular exosome  
Ontology : EGO-EBImolecular_function  ATP binding  cytoplasm  protein folding  response to stress  biological_process  unfolded protein binding  extracellular exosome  
NDEx NetworkHSP90AA2P
Atlas of Cancer Signalling NetworkHSP90AA2P
Wikipedia pathwaysHSP90AA2P
Orthology - Evolution
OrthoDB3324
Phylogenetic Trees/Animal Genes : TreeFamHSP90AA2P
HOVERGENQ14568
HOGENOMQ14568
Homologs : HomoloGeneHSP90AA2P
Homology/Alignments : Family Browser (UCSC)HSP90AA2P
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerHSP90AA2P [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)HSP90AA2P
dbVarHSP90AA2P
ClinVarHSP90AA2P
1000_GenomesHSP90AA2P 
Exome Variant ServerHSP90AA2P
ExAC (Exome Aggregation Consortium)HSP90AA2P (select the gene name)
Genetic variants : HAPMAP3324
Genomic Variants (DGV)HSP90AA2P [DGVbeta]
DECIPHER (Syndromes)11:27911648-27912921  
CONAN: Copy Number AnalysisHSP90AA2P 
Mutations
ICGC Data PortalHSP90AA2P 
TCGA Data PortalHSP90AA2P 
Broad Tumor PortalHSP90AA2P
OASIS PortalHSP90AA2P [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDHSP90AA2P
BioMutasearch HSP90AA2P
DgiDB (Drug Gene Interaction Database)HSP90AA2P
DoCM (Curated mutations)HSP90AA2P (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)HSP90AA2P (select a term)
intoGenHSP90AA2P
Cancer3DHSP90AA2P(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM140575   
Orphanet
MedgenHSP90AA2P
Genetic Testing Registry HSP90AA2P
NextProtQ14568 [Medical]
TSGene3324
GENETestsHSP90AA2P
Huge Navigator HSP90AA2P [HugePedia]
snp3D : Map Gene to Disease3324
BioCentury BCIQHSP90AA2P
ClinGenHSP90AA2P
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD3324
Chemical/Pharm GKB GenePA29522
Clinical trialHSP90AA2P
Miscellaneous
canSAR (ICR)HSP90AA2P (select the gene name)
Probes
Litterature
PubMed28 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineHSP90AA2P
EVEXHSP90AA2P
GoPubMedHSP90AA2P
iHOPHSP90AA2P
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Mar 30 15:04:26 CEST 2017

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