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HSP90AA5P (heat shock protein 90kDa alpha (cytosolic), class A member 5, pseudogene)

Identity

Alias_namesheat shock protein 90kDa alpha (cytosolic), class A member 5, pseudogene
Other aliasHSP90Ae
HGNC (Hugo) HSP90AA5P
LocusID (NCBI) 730211
Atlas_Id 64452
Location 3q27.1  [Link to chromosome band 3q27]
Location_base_pair Starts at 183829370 and ends at 183835686 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)HSP90AA5P   32535
Cards
Entrez_Gene (NCBI)HSP90AA5P  730211  heat shock protein 90kDa alpha (cytosolic), class A member 5, pseudogene
AliasesHSP90Ae
GeneCards (Weizmann)HSP90AA5P
Ensembl hg19 (Hinxton) [Gene_View]  chr3:183829370-183835686 [Contig_View]  HSP90AA5P [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr3:183829370-183835686 [Contig_View]  HSP90AA5P [Vega]
TCGA cBioPortalHSP90AA5P
AceView (NCBI)HSP90AA5P
Genatlas (Paris)HSP90AA5P
WikiGenes730211
SOURCE (Princeton)HSP90AA5P
Genetics Home Reference (NIH)HSP90AA5P
Genomic and cartography
GoldenPath hg19 (UCSC)HSP90AA5P  -     chr3:183829370-183835686 +  3q27.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)HSP90AA5P  -     3q27.1   [Description]    (hg38-Dec_2013)
EnsemblHSP90AA5P - 3q27.1 [CytoView hg19]  HSP90AA5P - 3q27.1 [CytoView hg38]
Mapping of homologs : NCBIHSP90AA5P [Mapview hg19]  HSP90AA5P [Mapview hg38]
Gene and transcription
Genbank (Entrez)AY956761
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000003 NC_018914 NG_005673 NT_005612 NW_004929311
Consensus coding sequences : CCDS (NCBI)HSP90AA5P
Cluster EST : UnigeneHs.581644 [ NCBI ]
CGAP (NCI)Hs.581644
Gene ExpressionHSP90AA5P [ NCBI-GEO ]   HSP90AA5P [ EBI - ARRAY_EXPRESS ]   HSP90AA5P [ SEEK ]   HSP90AA5P [ MEM ]
Gene Expression Viewer (FireBrowse)HSP90AA5P [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)730211
GTEX Portal (Tissue expression)HSP90AA5P
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ58FG0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ58FG0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ58FG0
Splice isoforms : SwissVarQ58FG0
PhosPhoSitePlusQ58FG0
Domains : Interpro (EBI)HATPase_C    Hsp90_fam    Ribosomal_S5_D2-typ_fold   
Domain families : Pfam (Sanger)HSP90 (PF00183)   
Domain families : Pfam (NCBI)pfam00183   
Conserved Domain (NCBI)HSP90AA5P
DMDM Disease mutations730211
Blocks (Seattle)HSP90AA5P
SuperfamilyQ58FG0
Peptide AtlasQ58FG0
IPIIPI00555876   
Protein Interaction databases
DIP (DOE-UCLA)Q58FG0
IntAct (EBI)Q58FG0
BioGRIDHSP90AA5P
STRING (EMBL)HSP90AA5P
ZODIACHSP90AA5P
Ontologies - Pathways
QuickGOQ58FG0
Ontology : AmiGOATP binding  cytoplasm  protein folding  response to stress  unfolded protein binding  
Ontology : EGO-EBIATP binding  cytoplasm  protein folding  response to stress  unfolded protein binding  
NDEx NetworkHSP90AA5P
Atlas of Cancer Signalling NetworkHSP90AA5P
Wikipedia pathwaysHSP90AA5P
Orthology - Evolution
OrthoDB730211
Phylogenetic Trees/Animal Genes : TreeFamHSP90AA5P
HOVERGENQ58FG0
HOGENOMQ58FG0
Homologs : HomoloGeneHSP90AA5P
Homology/Alignments : Family Browser (UCSC)HSP90AA5P
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerHSP90AA5P [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)HSP90AA5P
dbVarHSP90AA5P
ClinVarHSP90AA5P
1000_GenomesHSP90AA5P 
Exome Variant ServerHSP90AA5P
ExAC (Exome Aggregation Consortium)HSP90AA5P (select the gene name)
Genetic variants : HAPMAP730211
Genomic Variants (DGV)HSP90AA5P [DGVbeta]
DECIPHER (Syndromes)3:183829370-183835686  
CONAN: Copy Number AnalysisHSP90AA5P 
Mutations
ICGC Data PortalHSP90AA5P 
TCGA Data PortalHSP90AA5P 
Broad Tumor PortalHSP90AA5P
OASIS PortalHSP90AA5P [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDHSP90AA5P
BioMutasearch HSP90AA5P
DgiDB (Drug Gene Interaction Database)HSP90AA5P
DoCM (Curated mutations)HSP90AA5P (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)HSP90AA5P (select a term)
intoGenHSP90AA5P
Cancer3DHSP90AA5P(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenHSP90AA5P
Genetic Testing Registry HSP90AA5P
NextProtQ58FG0 [Medical]
TSGene730211
GENETestsHSP90AA5P
Huge Navigator HSP90AA5P [HugePedia]
snp3D : Map Gene to Disease730211
BioCentury BCIQHSP90AA5P
ClinGenHSP90AA5P
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD730211
Chemical/Pharm GKB GenePA143485493
Clinical trialHSP90AA5P
Miscellaneous
canSAR (ICR)HSP90AA5P (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineHSP90AA5P
EVEXHSP90AA5P
GoPubMedHSP90AA5P
iHOPHSP90AA5P
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:08:18 CET 2017

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