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HSP90AB2P (heat shock protein 90 alpha family class B member 2, pseudogene)

Identity

Alias_namesheat shock protein 90kDa alpha (cytosolic)
Alias_symbol (synonym)HSP90BB
Other alias
HGNC (Hugo) HSP90AB2P
LocusID (NCBI) 391634
Atlas_Id 47283
Location 4p15.33  [Link to chromosome band 4p15]
Location_base_pair Starts at 13333414 and ends at 13338302 bp from pter ( according to hg38-Dec_2013)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)HSP90AB2P   32537
Cards
Entrez_Gene (NCBI)HSP90AB2P  391634  heat shock protein 90 alpha family class B member 2, pseudogene
AliasesHSP90BB
GeneCards (Weizmann)HSP90AB2P
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr4:13333414-13338302 [Contig_View]  HSP90AB2P [Vega]
TCGA cBioPortalHSP90AB2P
AceView (NCBI)HSP90AB2P
Genatlas (Paris)HSP90AB2P
WikiGenes391634
SOURCE (Princeton)HSP90AB2P
Genetics Home Reference (NIH)HSP90AB2P
Genomic and cartography
GoldenPath hg38 (UCSC)HSP90AB2P  -     chr4:13333414-13338302 +  4p15.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)HSP90AB2P  -     4p15.33   [Description]    (hg19-Feb_2009)
EnsemblHSP90AB2P - 4p15.33 [CytoView hg19]  HSP90AB2P - 4p15.33 [CytoView hg38]
Mapping of homologs : NCBIHSP90AB2P [Mapview hg19]  HSP90AB2P [Mapview hg38]
Gene and transcription
Genbank (Entrez)AY956763
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)HSP90AB2P
Cluster EST : UnigeneHs.590925 [ NCBI ]
CGAP (NCI)Hs.590925
Gene ExpressionHSP90AB2P [ NCBI-GEO ]   HSP90AB2P [ EBI - ARRAY_EXPRESS ]   HSP90AB2P [ SEEK ]   HSP90AB2P [ MEM ]
Gene Expression Viewer (FireBrowse)HSP90AB2P [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)391634
GTEX Portal (Tissue expression)HSP90AB2P
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ58FF8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ58FF8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ58FF8
Splice isoforms : SwissVarQ58FF8
PhosPhoSitePlusQ58FF8
Domains : Interpro (EBI)HATPase_C    Hsp90_fam    Hsp90_N    Ribosomal_S5_D2-typ_fold   
Domain families : Pfam (Sanger)HATPase_c (PF02518)    HSP90 (PF00183)   
Domain families : Pfam (NCBI)pfam02518    pfam00183   
Conserved Domain (NCBI)HSP90AB2P
DMDM Disease mutations391634
Blocks (Seattle)HSP90AB2P
SuperfamilyQ58FF8
Peptide AtlasQ58FF8
HPRD11811
IPIIPI00455599   
Protein Interaction databases
DIP (DOE-UCLA)Q58FF8
IntAct (EBI)Q58FF8
BioGRIDHSP90AB2P
STRING (EMBL)HSP90AB2P
ZODIACHSP90AB2P
Ontologies - Pathways
QuickGOQ58FF8
Ontology : AmiGOmolecular_function  ATP binding  cytoplasm  protein folding  response to stress  biological_process  unfolded protein binding  extracellular exosome  
Ontology : EGO-EBImolecular_function  ATP binding  cytoplasm  protein folding  response to stress  biological_process  unfolded protein binding  extracellular exosome  
NDEx NetworkHSP90AB2P
Atlas of Cancer Signalling NetworkHSP90AB2P
Wikipedia pathwaysHSP90AB2P
Orthology - Evolution
OrthoDB391634
Phylogenetic Trees/Animal Genes : TreeFamHSP90AB2P
HOVERGENQ58FF8
HOGENOMQ58FF8
Homologs : HomoloGeneHSP90AB2P
Homology/Alignments : Family Browser (UCSC)HSP90AB2P
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerHSP90AB2P [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)HSP90AB2P
dbVarHSP90AB2P
ClinVarHSP90AB2P
1000_GenomesHSP90AB2P 
Exome Variant ServerHSP90AB2P
ExAC (Exome Aggregation Consortium)HSP90AB2P (select the gene name)
Genetic variants : HAPMAP391634
Genomic Variants (DGV)HSP90AB2P [DGVbeta]
DECIPHERHSP90AB2P [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisHSP90AB2P 
Mutations
ICGC Data PortalHSP90AB2P 
TCGA Data PortalHSP90AB2P 
Broad Tumor PortalHSP90AB2P
OASIS PortalHSP90AB2P [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICHSP90AB2P  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDHSP90AB2P
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch HSP90AB2P
DgiDB (Drug Gene Interaction Database)HSP90AB2P
DoCM (Curated mutations)HSP90AB2P (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)HSP90AB2P (select a term)
intoGenHSP90AB2P
Cancer3DHSP90AB2P(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenHSP90AB2P
Genetic Testing Registry HSP90AB2P
NextProtQ58FF8 [Medical]
TSGene391634
GENETestsHSP90AB2P
Target ValidationHSP90AB2P
Huge Navigator HSP90AB2P [HugePedia]
snp3D : Map Gene to Disease391634
BioCentury BCIQHSP90AB2P
ClinGenHSP90AB2P
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD391634
Chemical/Pharm GKB GenePA143485495
Clinical trialHSP90AB2P
Miscellaneous
canSAR (ICR)HSP90AB2P (select the gene name)
Probes
Litterature
PubMed16 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineHSP90AB2P
EVEXHSP90AB2P
GoPubMedHSP90AB2P
iHOPHSP90AB2P
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Aug 1 17:03:30 CEST 2017

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