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HSP90B2P (heat shock protein 90 beta family member 2, pseudogene)

Identity

Alias (NCBI)GRP94P1
GRP94b
HSP
HSPCP2
TRA1P1
TRAP1
HGNC (Hugo) HSP90B2P
HGNC Alias symbGRP94P1
GRP94b
HGNC Previous nameTRAP1
 TRA1P1
 HSPCP2
HGNC Previous nametumor rejection antigen (gp96) pseudogene 1
 tumor rejection antigen (gp96) 1 pseudogene 1
 heat shock protein 90kDa beta (Grp94), member 2, pseudogene
LocusID (NCBI) 7190
Atlas_Id 42953
Location 15q26.3  [Link to chromosome band 15q26]
Location_base_pair Starts at 99257525 and ends at 99260276 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)HSP90B2P   12099
Cards
Entrez_Gene (NCBI)HSP90B2P    heat shock protein 90 beta family member 2, pseudogene
AliasesGRP94P1; GRP94b; HSP; HSPCP2; 
TRA1P1; TRAP1
GeneCards (Weizmann)HSP90B2P
Ensembl hg19 (Hinxton)ENSG00000259706 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000259706 [Gene_View]  ENSG00000259706 [Sequence]  chr15:99257525-99260276 [Contig_View]  HSP90B2P [Vega]
ICGC DataPortalENSG00000259706
TCGA cBioPortalHSP90B2P
AceView (NCBI)HSP90B2P
Genatlas (Paris)HSP90B2P
SOURCE (Princeton)HSP90B2P
Genetics Home Reference (NIH)HSP90B2P
Genomic and cartography
GoldenPath hg38 (UCSC)HSP90B2P  -     chr15:99257525-99260276 +  15q26.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)HSP90B2P  -     15q26.3   [Description]    (hg19-Feb_2009)
GoldenPathHSP90B2P - 15q26.3 [CytoView hg19]  HSP90B2P - 15q26.3 [CytoView hg38]
ImmunoBaseENSG00000259706
Genome Data Viewer NCBIHSP90B2P [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AY956768 R13549
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)HSP90B2P
Gene ExpressionHSP90B2P [ NCBI-GEO ]   HSP90B2P [ EBI - ARRAY_EXPRESS ]   HSP90B2P [ SEEK ]   HSP90B2P [ MEM ]
Gene Expression Viewer (FireBrowse)HSP90B2P [ Firebrowse - Broad ]
GenevisibleExpression of HSP90B2P in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)7190
GTEX Portal (Tissue expression)HSP90B2P
Human Protein AtlasENSG00000259706-HSP90B2P [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ58FF3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ58FF3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ58FF3
PhosPhoSitePlusQ58FF3
Domaine pattern : Prosite (Expaxy)ER_TARGET (PS00014)   
Domains : Interpro (EBI)HSP90_C    Hsp90_fam    Ribosomal_S5_D2-typ_fold   
Domain families : Pfam (Sanger)HSP90 (PF00183)   
Domain families : Pfam (NCBI)pfam00183   
Conserved Domain (NCBI)HSP90B2P
SuperfamilyQ58FF3
AlphaFold pdb e-kbQ58FF3   
Human Protein Atlas [tissue]ENSG00000259706-HSP90B2P [tissue]
Protein Interaction databases
DIP (DOE-UCLA)Q58FF3
IntAct (EBI)Q58FF3
BioGRIDHSP90B2P
STRING (EMBL)HSP90B2P
ZODIACHSP90B2P
Ontologies - Pathways
QuickGOQ58FF3
Ontology : AmiGOATP binding  mitochondrial inner membrane  protein folding  protein kinase binding  unfolded protein binding  
Ontology : EGO-EBIATP binding  mitochondrial inner membrane  protein folding  protein kinase binding  unfolded protein binding  
NDEx NetworkHSP90B2P
Atlas of Cancer Signalling NetworkHSP90B2P
Wikipedia pathwaysHSP90B2P
Orthology - Evolution
OrthoDB7190
GeneTree (enSembl)ENSG00000259706
Phylogenetic Trees/Animal Genes : TreeFamHSP90B2P
Homologs : HomoloGeneHSP90B2P
Homology/Alignments : Family Browser (UCSC)HSP90B2P
Gene fusions - Rearrangements
Fusion : QuiverHSP90B2P
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerHSP90B2P [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)HSP90B2P
dbVarHSP90B2P
ClinVarHSP90B2P
MonarchHSP90B2P
1000_GenomesHSP90B2P 
Exome Variant ServerHSP90B2P
GNOMAD BrowserENSG00000259706
Varsome BrowserHSP90B2P
ACMGHSP90B2P variants
VarityQ58FF3
Genomic Variants (DGV)HSP90B2P [DGVbeta]
DECIPHERHSP90B2P [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisHSP90B2P 
Mutations
ICGC Data PortalHSP90B2P 
TCGA Data PortalHSP90B2P 
Broad Tumor PortalHSP90B2P
OASIS PortalHSP90B2P [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDHSP90B2P
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaHSP90B2P
DgiDB (Drug Gene Interaction Database)HSP90B2P
DoCM (Curated mutations)HSP90B2P
CIViC (Clinical Interpretations of Variants in Cancer)HSP90B2P
Cancer3DHSP90B2P
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETHSP90B2P
MedgenHSP90B2P
Genetic Testing Registry HSP90B2P
NextProtQ58FF3 [Medical]
GENETestsHSP90B2P
Target ValidationHSP90B2P
Huge Navigator HSP90B2P [HugePedia]
ClinGenHSP90B2P
Clinical trials, drugs, therapy
MyCancerGenomeHSP90B2P
Protein Interactions : CTDHSP90B2P
Pharm GKB GenePA134913415
PharosQ58FF3
Clinical trialHSP90B2P
Miscellaneous
canSAR (ICR)HSP90B2P
HarmonizomeHSP90B2P
DataMed IndexHSP90B2P
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXHSP90B2P
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 15:13:07 CEST 2021

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