Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

HSPA14 (heat shock protein family A (Hsp70) member 14)

Identity

Alias_namesheat shock 70kDa protein 14
Alias_symbol (synonym)HSP70-4
HSP70L1
Other alias
HGNC (Hugo) HSPA14
LocusID (NCBI) 51182
Atlas_Id 46999
Location 10p13  [Link to chromosome band 10p13]
Location_base_pair Starts at 14838160 and ends at 14846999 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
GYS1 (19q13.33) / HSPA14 (10p13)HSPA14 (10p13) / MRPS35 (12p11.22)HSPA14 10p13 / MRPS35 12p11.22

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)HSPA14   29526
Cards
Entrez_Gene (NCBI)HSPA14  51182  heat shock protein family A (Hsp70) member 14
AliasesHSP70-4; HSP70L1
GeneCards (Weizmann)HSPA14
Ensembl hg19 (Hinxton)ENSG00000187522 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000187522 [Gene_View]  chr10:14838160-14846999 [Contig_View]  HSPA14 [Vega]
ICGC DataPortalENSG00000187522
TCGA cBioPortalHSPA14
AceView (NCBI)HSPA14
Genatlas (Paris)HSPA14
WikiGenes51182
SOURCE (Princeton)HSPA14
Genetics Home Reference (NIH)HSPA14
Genomic and cartography
GoldenPath hg38 (UCSC)HSPA14  -     chr10:14838160-14846999 +  10p13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)HSPA14  -     10p13   [Description]    (hg19-Feb_2009)
EnsemblHSPA14 - 10p13 [CytoView hg19]  HSPA14 - 10p13 [CytoView hg38]
Mapping of homologs : NCBIHSPA14 [Mapview hg19]  HSPA14 [Mapview hg38]
OMIM610369   
Gene and transcription
Genbank (Entrez)AA782088 AF112210 AF143723 AK000880 AK225265
RefSeq transcript (Entrez)NM_001037538 NM_001278205 NM_016299
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)HSPA14
Cluster EST : UnigeneHs.736996 [ NCBI ]
CGAP (NCI)Hs.736996
Alternative Splicing GalleryENSG00000187522
Gene ExpressionHSPA14 [ NCBI-GEO ]   HSPA14 [ EBI - ARRAY_EXPRESS ]   HSPA14 [ SEEK ]   HSPA14 [ MEM ]
Gene Expression Viewer (FireBrowse)HSPA14 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)51182
GTEX Portal (Tissue expression)HSPA14
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ0VDF9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ0VDF9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ0VDF9
Splice isoforms : SwissVarQ0VDF9
PhosPhoSitePlusQ0VDF9
Domaine pattern : Prosite (Expaxy)HSP70_3 (PS01036)   
Domains : Interpro (EBI)Heat_shock_70_CS    HSP70_peptide-bd    Hsp_70_fam   
Domain families : Pfam (Sanger)HSP70 (PF00012)   
Domain families : Pfam (NCBI)pfam00012   
Conserved Domain (NCBI)HSPA14
DMDM Disease mutations51182
Blocks (Seattle)HSPA14
SuperfamilyQ0VDF9
Human Protein AtlasENSG00000187522
Peptide AtlasQ0VDF9
HPRD07021
IPIIPI00292499   IPI00152085   IPI00439715   IPI00646895   IPI00641176   
Protein Interaction databases
DIP (DOE-UCLA)Q0VDF9
IntAct (EBI)Q0VDF9
FunCoupENSG00000187522
BioGRIDHSPA14
STRING (EMBL)HSPA14
ZODIACHSPA14
Ontologies - Pathways
QuickGOQ0VDF9
Ontology : AmiGOprotein binding  ATP binding  cytosol  ribosome  membrane  'de novo' cotranslational protein folding  
Ontology : EGO-EBIprotein binding  ATP binding  cytosol  ribosome  membrane  'de novo' cotranslational protein folding  
NDEx NetworkHSPA14
Atlas of Cancer Signalling NetworkHSPA14
Wikipedia pathwaysHSPA14
Orthology - Evolution
OrthoDB51182
GeneTree (enSembl)ENSG00000187522
Phylogenetic Trees/Animal Genes : TreeFamHSPA14
HOVERGENQ0VDF9
HOGENOMQ0VDF9
Homologs : HomoloGeneHSPA14
Homology/Alignments : Family Browser (UCSC)HSPA14
Gene fusions - Rearrangements
Fusion : MitelmanHSPA14/MRPS35 [10p13/12p11.22]  
Fusion: TCGAHSPA14 10p13 MRPS35 12p11.22 BRCA
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerHSPA14 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)HSPA14
dbVarHSPA14
ClinVarHSPA14
1000_GenomesHSPA14 
Exome Variant ServerHSPA14
ExAC (Exome Aggregation Consortium)HSPA14 (select the gene name)
Genetic variants : HAPMAP51182
Genomic Variants (DGV)HSPA14 [DGVbeta]
DECIPHERHSPA14 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisHSPA14 
Mutations
ICGC Data PortalHSPA14 
TCGA Data PortalHSPA14 
Broad Tumor PortalHSPA14
OASIS PortalHSPA14 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICHSPA14  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDHSPA14
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch HSPA14
DgiDB (Drug Gene Interaction Database)HSPA14
DoCM (Curated mutations)HSPA14 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)HSPA14 (select a term)
intoGenHSPA14
Cancer3DHSPA14(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM610369   
Orphanet
MedgenHSPA14
Genetic Testing Registry HSPA14
NextProtQ0VDF9 [Medical]
TSGene51182
GENETestsHSPA14
Huge Navigator HSPA14 [HugePedia]
snp3D : Map Gene to Disease51182
BioCentury BCIQHSPA14
ClinGenHSPA14
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD51182
Chemical/Pharm GKB GenePA134979057
Clinical trialHSPA14
Miscellaneous
canSAR (ICR)HSPA14 (select the gene name)
Probes
Litterature
PubMed30 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineHSPA14
EVEXHSPA14
GoPubMedHSPA14
iHOPHSPA14
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri May 19 12:19:38 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.