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HSPB7 (heat shock protein family B (small) member 7)

Identity

Alias_namesheat shock 27kD protein family, member 7 (cardiovascular)
heat shock 27kDa protein family, member 7 (cardiovascular)
Alias_symbol (synonym)cvHSP
Other alias
HGNC (Hugo) HSPB7
LocusID (NCBI) 27129
Atlas_Id 40882
Location 1p36.13  [Link to chromosome band 1p36]
Location_base_pair Starts at 16014028 and ends at 16019594 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
HSPB7 (1p36.13) / HSPB7 (1p36.13)MOB2 (11p15.5) / HSPB7 (1p36.13)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)HSPB7   5249
Cards
Entrez_Gene (NCBI)HSPB7  27129  heat shock protein family B (small) member 7
AliasescvHSP
GeneCards (Weizmann)HSPB7
Ensembl hg19 (Hinxton)ENSG00000173641 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000173641 [Gene_View]  chr1:16014028-16019594 [Contig_View]  HSPB7 [Vega]
ICGC DataPortalENSG00000173641
TCGA cBioPortalHSPB7
AceView (NCBI)HSPB7
Genatlas (Paris)HSPB7
WikiGenes27129
SOURCE (Princeton)HSPB7
Genetics Home Reference (NIH)HSPB7
Genomic and cartography
GoldenPath hg38 (UCSC)HSPB7  -     chr1:16014028-16019594 -  1p36.13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)HSPB7  -     1p36.13   [Description]    (hg19-Feb_2009)
EnsemblHSPB7 - 1p36.13 [CytoView hg19]  HSPB7 - 1p36.13 [CytoView hg38]
Mapping of homologs : NCBIHSPB7 [Mapview hg19]  HSPB7 [Mapview hg38]
OMIM610692   
Gene and transcription
Genbank (Entrez)AF155908 AJ243191 AK057295 AK075151 AK092275
RefSeq transcript (Entrez)NM_001349682 NM_001349683 NM_001349685 NM_001349686 NM_001349687 NM_001349688 NM_001349689 NM_014424
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)HSPB7
Cluster EST : UnigeneHs.502612 [ NCBI ]
CGAP (NCI)Hs.502612
Alternative Splicing GalleryENSG00000173641
Gene ExpressionHSPB7 [ NCBI-GEO ]   HSPB7 [ EBI - ARRAY_EXPRESS ]   HSPB7 [ SEEK ]   HSPB7 [ MEM ]
Gene Expression Viewer (FireBrowse)HSPB7 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)27129
GTEX Portal (Tissue expression)HSPB7
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9UBY9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9UBY9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9UBY9
Splice isoforms : SwissVarQ9UBY9
PhosPhoSitePlusQ9UBY9
Domaine pattern : Prosite (Expaxy)HSP20 (PS01031)   
Domains : Interpro (EBI)A-crystallin/Hsp20_dom    Alpha-crystallin/HSP    HSP20    HSP20-like_chaperone   
Domain families : Pfam (Sanger)HSP20 (PF00011)   
Domain families : Pfam (NCBI)pfam00011   
Conserved Domain (NCBI)HSPB7
DMDM Disease mutations27129
Blocks (Seattle)HSPB7
SuperfamilyQ9UBY9
Human Protein AtlasENSG00000173641
Peptide AtlasQ9UBY9
HPRD13684
IPIIPI00902998   IPI00375714   IPI00220916   IPI00641046   IPI00947484   IPI00944996   IPI00947083   
Protein Interaction databases
DIP (DOE-UCLA)Q9UBY9
IntAct (EBI)Q9UBY9
FunCoupENSG00000173641
BioGRIDHSPB7
STRING (EMBL)HSPB7
ZODIACHSPB7
Ontologies - Pathways
QuickGOQ9UBY9
Ontology : AmiGOprotein binding  nucleus  nucleoplasm  cytoplasm  mitochondrion  response to unfolded protein  regulation of heart contraction  protein C-terminus binding  Cajal body  actin cytoskeleton  aggresome  filamin binding  
Ontology : EGO-EBIprotein binding  nucleus  nucleoplasm  cytoplasm  mitochondrion  response to unfolded protein  regulation of heart contraction  protein C-terminus binding  Cajal body  actin cytoskeleton  aggresome  filamin binding  
NDEx NetworkHSPB7
Atlas of Cancer Signalling NetworkHSPB7
Wikipedia pathwaysHSPB7
Orthology - Evolution
OrthoDB27129
GeneTree (enSembl)ENSG00000173641
Phylogenetic Trees/Animal Genes : TreeFamHSPB7
HOVERGENQ9UBY9
HOGENOMQ9UBY9
Homologs : HomoloGeneHSPB7
Homology/Alignments : Family Browser (UCSC)HSPB7
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerHSPB7 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)HSPB7
dbVarHSPB7
ClinVarHSPB7
1000_GenomesHSPB7 
Exome Variant ServerHSPB7
ExAC (Exome Aggregation Consortium)HSPB7 (select the gene name)
Genetic variants : HAPMAP27129
Genomic Variants (DGV)HSPB7 [DGVbeta]
DECIPHERHSPB7 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisHSPB7 
Mutations
ICGC Data PortalHSPB7 
TCGA Data PortalHSPB7 
Broad Tumor PortalHSPB7
OASIS PortalHSPB7 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICHSPB7  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDHSPB7
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)MSeqDR-LSDB Mitochondrial Disease Locus Specific Database
BioMutasearch HSPB7
DgiDB (Drug Gene Interaction Database)HSPB7
DoCM (Curated mutations)HSPB7 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)HSPB7 (select a term)
intoGenHSPB7
Cancer3DHSPB7(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM610692   
Orphanet
MedgenHSPB7
Genetic Testing Registry HSPB7
NextProtQ9UBY9 [Medical]
TSGene27129
GENETestsHSPB7
Target ValidationHSPB7
Huge Navigator HSPB7 [HugePedia]
snp3D : Map Gene to Disease27129
BioCentury BCIQHSPB7
ClinGenHSPB7
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD27129
Chemical/Pharm GKB GenePA29514
Clinical trialHSPB7
Miscellaneous
canSAR (ICR)HSPB7 (select the gene name)
Probes
Litterature
PubMed21 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineHSPB7
EVEXHSPB7
GoPubMedHSPB7
iHOPHSPB7
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 12:37:42 CEST 2017

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