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HSPB8 (heat shock 22kDa protein 8)

Identity

Other namesCMT2L
DHMN2
E2IG1
H11
HMN2
HMN2A
HSP22
HGNC (Hugo) HSPB8
LocusID (NCBI) 26353
Location 12q24.23
Location_base_pair Starts at 119616595 and ends at 119632551 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)HSPB8   30171
Cards
Entrez_Gene (NCBI)HSPB8  26353  heat shock 22kDa protein 8
GeneCards (Weizmann)HSPB8
Ensembl (Hinxton)ENSG00000152137 [Gene_View]  chr12:119616595-119632551 [Contig_View]  HSPB8 [Vega]
ICGC DataPortalENSG00000152137
AceView (NCBI)HSPB8
Genatlas (Paris)HSPB8
WikiGenes26353
SOURCE (Princeton)NM_014365
Genomic and cartography
GoldenPath (UCSC)HSPB8  -  12q24.23   chr12:119616595-119632551 +  12q24.23   [Description]    (hg19-Feb_2009)
EnsemblHSPB8 - 12q24.23 [CytoView]
Mapping of homologs : NCBIHSPB8 [Mapview]
OMIM158590   608014   608673   
Gene and transcription
Genbank (Entrez)AF133207 AF191017 AF217987 AF250138 AK001825
RefSeq transcript (Entrez)NM_014365
RefSeq genomic (Entrez)AC_000144 NC_000012 NC_018923 NG_007953 NT_009775 NW_001838063 NW_004929385
Consensus coding sequences : CCDS (NCBI)HSPB8
Cluster EST : UnigeneHs.400095 [ NCBI ]
CGAP (NCI)Hs.400095
Alternative Splicing : Fast-db (Paris)GSHG0007046
Alternative Splicing GalleryENSG00000152137
Gene ExpressionHSPB8 [ NCBI-GEO ]     HSPB8 [ SEEK ]   HSPB8 [ MEM ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9UJY1 (Uniprot)
NextProtQ9UJY1  [Medical]
With graphics : InterProQ9UJY1
Splice isoforms : SwissVarQ9UJY1 (Swissvar)
Domaine pattern : Prosite (Expaxy)HSP20 (PS01031)   
Domains : Interpro (EBI)a-crystallin/Hsp20_dom    Alpha-crystallin/HSP    HSP20-like_chaperone   
Related proteins : CluSTrQ9UJY1
Domain families : Pfam (Sanger)HSP20 (PF00011)   
Domain families : Pfam (NCBI)pfam00011   
DMDM Disease mutations26353
Blocks (Seattle)Q9UJY1
Human Protein AtlasENSG00000152137 [gene] [tissue] [antibody] [cell] [cancer]
Peptide AtlasQ9UJY1
HPRD06420
IPIIPI00007264   IPI01014745   
Protein Interaction databases
DIP (DOE-UCLA)Q9UJY1
IntAct (EBI)Q9UJY1
FunCoupENSG00000152137
BioGRIDHSPB8
InParanoidQ9UJY1
Interologous Interaction database Q9UJY1
IntegromeDBHSPB8
STRING (EMBL)HSPB8
Ontologies - Pathways
Ontology : AmiGOprotein kinase activity  protein binding  intracellular  nucleus  cytoplasm  response to stress  biological_process  cell death  identical protein binding  
Ontology : EGO-EBIprotein kinase activity  protein binding  intracellular  nucleus  cytoplasm  response to stress  biological_process  cell death  identical protein binding  
Protein Interaction DatabaseHSPB8
Wikipedia pathwaysHSPB8
Gene fusion - rearrangments
Polymorphisms : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)HSPB8
SNP (GeneSNP Utah)HSPB8
SNP : HGBaseHSPB8
Genetic variants : HAPMAPHSPB8
1000_GenomesHSPB8 
ICGC programENSG00000152137 
Somatic Mutations in Cancer : COSMICHSPB8 
CONAN: Copy Number AnalysisHSPB8 
Mutations and Diseases : HGMDHSPB8
OMIM158590    608014    608673   
MedgenHSPB8
GENETestsHSPB8
Disease Genetic AssociationHSPB8
Huge Navigator HSPB8 [HugePedia]  HSPB8 [HugeCancerGEM]
Genomic VariantsHSPB8  HSPB8 [DGVbeta]
Exome VariantHSPB8
dbVarHSPB8
ClinVarHSPB8
snp3D : Map Gene to Disease26353
General knowledge
Homologs : HomoloGeneHSPB8
Homology/Alignments : Family Browser (UCSC)HSPB8
Phylogenetic Trees/Animal Genes : TreeFamHSPB8
Chemical/Protein Interactions : CTD26353
Chemical/Pharm GKB GenePA134900173
Clinical trialHSPB8
Cancer Resource (Charite)ENSG00000152137
Other databases
Probes
Litterature
PubMed76 Pubmed reference(s) in Entrez
CoreMineHSPB8
iHOPHSPB8
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated12-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sat Jun 21 13:39:48 CEST 2014

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