Atlas of Genetics and Cytogenetics in Oncology and Haematology


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HTR7P1 (5-hydroxytryptamine (serotonin) receptor 7 pseudogene 1)

Identity

Alias_namesHTR7P
5-hydroxytryptamine (serotonin) receptor 7 pseudogene
5-hydroxytryptamine (serotonin) receptor 7 pseudogene 1
Other alias
HGNC (Hugo) HTR7P1
LocusID (NCBI) 93164
Atlas_Id 64476
Location 12p13.1  [Link to chromosome band 12p13]
Location_base_pair Starts at 13153376 and ends at 13157764 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)HTR7P1   30411
Cards
Entrez_Gene (NCBI)HTR7P1  93164  5-hydroxytryptamine (serotonin) receptor 7 pseudogene 1
AliasesHTR7P
GeneCards (Weizmann)HTR7P1
Ensembl hg19 (Hinxton)ENSG00000183935 [Gene_View]  chr12:13153376-13157764 [Contig_View]  HTR7P1 [Vega]
Ensembl hg38 (Hinxton)ENSG00000183935 [Gene_View]  chr12:13153376-13157764 [Contig_View]  HTR7P1 [Vega]
ICGC DataPortalENSG00000183935
TCGA cBioPortalHTR7P1
AceView (NCBI)HTR7P1
Genatlas (Paris)HTR7P1
WikiGenes93164
SOURCE (Princeton)HTR7P1
Genetics Home Reference (NIH)HTR7P1
Genomic and cartography
GoldenPath hg19 (UCSC)HTR7P1  -     chr12:13153376-13157764 +  12p13.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)HTR7P1  -     12p13.1   [Description]    (hg38-Dec_2013)
EnsemblHTR7P1 - 12p13.1 [CytoView hg19]  HTR7P1 - 12p13.1 [CytoView hg38]
Mapping of homologs : NCBIHTR7P1 [Mapview hg19]  HTR7P1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK125093 U86813
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000012 NC_018923 NT_009714 NW_004929383
Consensus coding sequences : CCDS (NCBI)HTR7P1
Cluster EST : UnigeneHs.722632 [ NCBI ]
CGAP (NCI)Hs.722632
Alternative Splicing GalleryENSG00000183935
Gene ExpressionHTR7P1 [ NCBI-GEO ]   HTR7P1 [ EBI - ARRAY_EXPRESS ]   HTR7P1 [ SEEK ]   HTR7P1 [ MEM ]
Gene Expression Viewer (FireBrowse)HTR7P1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)93164
GTEX Portal (Tissue expression)HTR7P1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)HTR7P1
DMDM Disease mutations93164
Blocks (Seattle)HTR7P1
Human Protein AtlasENSG00000183935
IPIIPI00217511   
Protein Interaction databases
FunCoupENSG00000183935
BioGRIDHTR7P1
STRING (EMBL)HTR7P1
ZODIACHTR7P1
Ontologies - Pathways
Huge Navigator HTR7P1 [HugePedia]
snp3D : Map Gene to Disease93164
BioCentury BCIQHTR7P1
ClinGenHTR7P1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD93164
Chemical/Pharm GKB GenePA143485499
Clinical trialHTR7P1
Miscellaneous
canSAR (ICR)HTR7P1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineHTR7P1
EVEXHTR7P1
GoPubMedHTR7P1
iHOPHTR7P1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:08:24 CET 2017

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