Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

HYALP1 (hyaluronoglucosaminidase pseudogene 1)

Identity

Alias_symbol (synonym)HYAL6
Other alias
HGNC (Hugo) HYALP1
LocusID (NCBI) 26062
Atlas_Id 64479
Location 7q31.32  [Link to chromosome band 7q31]
Location_base_pair Starts at 123814139 and ends at 123819430 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)HYALP1   5324
Cards
Entrez_Gene (NCBI)HYALP1  26062  hyaluronoglucosaminidase pseudogene 1
AliasesHYAL6
GeneCards (Weizmann)HYALP1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr7:123814139-123819430 [Contig_View]  HYALP1 [Vega]
TCGA cBioPortalHYALP1
AceView (NCBI)HYALP1
Genatlas (Paris)HYALP1
WikiGenes26062
SOURCE (Princeton)HYALP1
Genetics Home Reference (NIH)HYALP1
Genomic and cartography
GoldenPath hg38 (UCSC)HYALP1  -     chr7:123814139-123819430 +  7q31.32   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)HYALP1  -     7q31.32   [Description]    (hg19-Feb_2009)
EnsemblHYALP1 - 7q31.32 [CytoView hg19]  HYALP1 - 7q31.32 [CytoView hg38]
Mapping of homologs : NCBIHYALP1 [Mapview hg19]  HYALP1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF149304
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)HYALP1
Cluster EST : UnigeneHs.381305 [ NCBI ]
CGAP (NCI)Hs.381305
Gene ExpressionHYALP1 [ NCBI-GEO ]   HYALP1 [ EBI - ARRAY_EXPRESS ]   HYALP1 [ SEEK ]   HYALP1 [ MEM ]
Gene Expression Viewer (FireBrowse)HYALP1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)26062
GTEX Portal (Tissue expression)HYALP1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)HYALP1
DMDM Disease mutations26062
Blocks (Seattle)HYALP1
IPIIPI00883728   
Protein Interaction databases
BioGRIDHYALP1
STRING (EMBL)HYALP1
ZODIACHYALP1
Ontologies - Pathways
Huge Navigator HYALP1 [HugePedia]
snp3D : Map Gene to Disease26062
BioCentury BCIQHYALP1
ClinGenHYALP1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD26062
Chemical/Pharm GKB GenePA29575
Clinical trialHYALP1
Miscellaneous
canSAR (ICR)HYALP1 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineHYALP1
EVEXHYALP1
GoPubMedHYALP1
iHOPHYALP1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 11:51:09 CET 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.