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HYDIN (HYDIN, axonemal central pair apparatus protein)

Identity

Other namesCILD5
HYDIN1
HYDIN2
PPP1R31
HGNC (Hugo) HYDIN
LocusID (NCBI) 54768
Location 16q22.2
Location_base_pair Starts at 71065314 and ends at 71264625 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)HYDIN   19368
Cards
Entrez_Gene (NCBI)HYDIN  54768  HYDIN, axonemal central pair apparatus protein
GeneCards (Weizmann)HYDIN
Ensembl (Hinxton)ENSG00000157423 [Gene_View]  chr16:71065314-71264625 [Contig_View]  HYDIN [Vega]
ICGC DataPortalENSG00000157423
AceView (NCBI)HYDIN
Genatlas (Paris)HYDIN
WikiGenes54768
SOURCE (Princeton)NM_001198542 NM_001198543 NM_001270974 NM_017558 NM_032821
Genomic and cartography
GoldenPath (UCSC)HYDIN  -  16q22.2   chr16:71065314-71264625 -  16q22.2   [Description]    (hg19-Feb_2009)
EnsemblHYDIN - 16q22.2 [CytoView]
Mapping of homologs : NCBIHYDIN [Mapview]
OMIM608647   610812   
Gene and transcription
Genbank (Entrez)AK022933 AK026688 AK057467 AK074472 AK299016
RefSeq transcript (Entrez)NM_001198542 NM_001198543 NM_001270974 NM_017558 NM_032821
RefSeq genomic (Entrez)AC_000148 NC_000016 NC_018927 NG_033116 NT_010498 NW_001838295 NW_001838296 NW_001838297 NW_001838298 NW_001838299 NW_001838300 NW_001838301 NW_001838302 NW_001838304 NW_001838305 NW_001838308 NW_001838309 NW_001838310 NW_001838311 NW_001838312 NW_001838315 NW_001838317 NW_001838320 NW_001838323 NW_001838324 NW_004929402
Consensus coding sequences : CCDS (NCBI)HYDIN
Cluster EST : UnigeneHs.745353 [ NCBI ]
CGAP (NCI)Hs.745353
Alternative Splicing : Fast-db (Paris)GSHG0033871
Alternative Splicing GalleryENSG00000157423
Gene ExpressionHYDIN [ NCBI-GEO ]     HYDIN [ SEEK ]   HYDIN [ MEM ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ4G0P3 (Uniprot)
NextProtQ4G0P3  [Medical]
With graphics : InterProQ4G0P3
Splice isoforms : SwissVarQ4G0P3 (Swissvar)
Domains : Interpro (EBI)P-loop_NTPase    PapD-like   
Related proteins : CluSTrQ4G0P3
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
DMDM Disease mutations54768
Blocks (Seattle)Q4G0P3
PDB (SRS)2E6J    2YS4   
PDB (PDBSum)2E6J    2YS4   
PDB (IMB)2E6J    2YS4   
PDB (RSDB)2E6J    2YS4   
Human Protein AtlasENSG00000157423
Peptide AtlasQ4G0P3
HPRD11042
Protein Interaction databases
DIP (DOE-UCLA)Q4G0P3
IntAct (EBI)Q4G0P3
FunCoupENSG00000157423
BioGRIDHYDIN
InParanoidQ4G0P3
Interologous Interaction database Q4G0P3
IntegromeDBHYDIN
STRING (EMBL)HYDIN
Ontologies - Pathways
Ontology : AmiGOcilium  
Ontology : EGO-EBIcilium  
Protein Interaction DatabaseHYDIN
Wikipedia pathwaysHYDIN
Gene fusion - rearrangments
Polymorphisms : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)HYDIN
SNP (GeneSNP Utah)HYDIN
SNP : HGBaseHYDIN
Genetic variants : HAPMAPHYDIN
1000_GenomesHYDIN 
ICGC programENSG00000157423 
CONAN: Copy Number AnalysisHYDIN 
Somatic Mutations in Cancer : COSMICHYDIN 
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
Mutations and Diseases : HGMDHYDIN
OMIM608647    610812   
MedgenHYDIN
GENETestsHYDIN
Disease Genetic AssociationHYDIN
Huge Navigator HYDIN [HugePedia]  HYDIN [HugeCancerGEM]
Genomic VariantsHYDIN  HYDIN [DGVbeta]
Exome VariantHYDIN
dbVarHYDIN
ClinVarHYDIN
snp3D : Map Gene to Disease54768
General knowledge
Homologs : HomoloGeneHYDIN
Homology/Alignments : Family Browser (UCSC)HYDIN
Phylogenetic Trees/Animal Genes : TreeFamHYDIN
Chemical/Protein Interactions : CTD54768
Chemical/Pharm GKB GenePA134866950
Clinical trialHYDIN
Cancer Resource (Charite)ENSG00000157423
Other databases
Probes
Litterature
PubMed15 Pubmed reference(s) in Entrez
CoreMineHYDIN
iHOPHYDIN
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated12-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 13 12:52:04 CEST 2014

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