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HYDIN2 (HYDIN2, axonemal central pair apparatus protein (pseudogene))

Identity

Alias_namesHYDINP1
hydrocephalus inducing homolog 2 (mouse)
HYDIN, axonemal central pair apparatus protein pseudogene 1
Other alias
HGNC (Hugo) HYDIN2
LocusID (NCBI) 100288805
Atlas_Id 79192
Location 1q21.1  [Link to chromosome band 1q21]
Location_base_pair Starts at 146486332 and ends at 146822034 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

,TD WIDTH=15%>canSAR (ICR)
Nomenclature
HGNC (Hugo)HYDIN2   33129
Cards
Entrez_Gene (NCBI)HYDIN2  100288805  HYDIN2, axonemal central pair apparatus protein (pseudogene)
AliasesHYDINP1
GeneCards (Weizmann)HYDIN2
Ensembl hg19 (Hinxton)ENSG00000276975 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000276975 [Gene_View]  chr1:146486332-146822034 [Contig_View]  HYDIN2 [Vega]
ICGC DataPortalENSG00000276975
TCGA cBioPortalHYDIN2
AceView (NCBI)HYDIN2
Genatlas (Paris)HYDIN2
WikiGenes100288805
SOURCE (Princeton)HYDIN2
Genetics Home Reference (NIH)HYDIN2
Genomic and cartography
GoldenPath hg38 (UCSC)HYDIN2  -     chr1:146486332-146822034 +  1q21.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)HYDIN2  -     1q21.1   [Description]    (hg19-Feb_2009)
EnsemblHYDIN2 - 1q21.1 [CytoView hg19]  HYDIN2 - 1q21.1 [CytoView hg38]
Mapping of homologs : NCBIHYDIN2 [Mapview hg19]  HYDIN2 [Mapview hg38]
OMIM610813   
Gene and transcription
Genbank (Entrez)AB058767 AK027571 AL833826 AL834340 BG292092
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)HYDIN2
Cluster EST : UnigeneHs.745406 [ NCBI ]
CGAP (NCI)Hs.745406
Alternative Splicing GalleryENSG00000276975
Gene ExpressionHYDIN2 [ NCBI-GEO ]   HYDIN2 [ EBI - ARRAY_EXPRESS ]   HYDIN2 [ SEEK ]   HYDIN2 [ MEM ]
Gene Expression Viewer (FireBrowse)HYDIN2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100288805
GTEX Portal (Tissue expression)HYDIN2
Human Protein AtlasENSG00000276975-HYDIN2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)HYDIN2
DMDM Disease mutations100288805
Blocks (Seattle)HYDIN2
Human Protein Atlas [tissue]ENSG00000276975-HYDIN2 [tissue]
IPIIPI00647188   IPI00843807   IPI00640533   IPI00641530   IPI00296510   IPI01010847   IPI00847834   IPI01014411   IPI00979723   IPI01009572   IPI00014215   IPI01012621   IPI01011563   IPI01013856   IPI01014101   IPI01012778   IPI01013309   IPI01013274   IPI01015312   
Protein Interaction databases
FunCoupENSG00000276975
BioGRIDHYDIN2
STRING (EMBL)HYDIN2
ZODIACHYDIN2
Ontologies - Pathways
Huge Navigator HYDIN2 [HugePedia]
snp3D : Map Gene to Disease100288805
BioCentury BCIQHYDIN2
ClinGenHYDIN2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100288805
Chemical/Pharm GKB GenePA162391892
Clinical trialHYDIN2
MiscellaneousHYDIN2 (select the gene name)
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineHYDIN2
EVEXHYDIN2
GoPubMedHYDIN2
iHOPHYDIN2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Nov 20 19:33:35 CET 2017

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