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HYPK (huntingtin interacting protein K)

Identity

Alias_namesC15orf63
chromosome 15 open reading frame 63
Alias_symbol (synonym)HSPC136
FLJ20431
Other alias
HGNC (Hugo) HYPK
LocusID (NCBI) 25764
Atlas_Id 64482
Location 15q15.3  [Link to chromosome band 15q15]
Location_base_pair Starts at 43800421 and ends at 43802571 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
HYPK (15q15.3) / CREB3L4 (1q21.3)HYPK (15q15.3) / HLA-DQA1 (6p21.32)HYPK (15q15.3) / HSPA4L (4q28.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)HYPK   18418
Cards
Entrez_Gene (NCBI)HYPK  25764  huntingtin interacting protein K
AliasesC15orf63; HSPC136
GeneCards (Weizmann)HYPK
Ensembl hg19 (Hinxton)ENSG00000140264 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000140264 [Gene_View]  chr15:43800421-43802571 [Contig_View]  HYPK [Vega]
ICGC DataPortalENSG00000140264
TCGA cBioPortalHYPK
AceView (NCBI)HYPK
Genatlas (Paris)HYPK
WikiGenes25764
SOURCE (Princeton)HYPK
Genetics Home Reference (NIH)HYPK
Genomic and cartography
GoldenPath hg38 (UCSC)HYPK  -     chr15:43800421-43802571 +  15q15.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)HYPK  -     15q15.3   [Description]    (hg19-Feb_2009)
EnsemblHYPK - 15q15.3 [CytoView hg19]  HYPK - 15q15.3 [CytoView hg38]
Mapping of homologs : NCBIHYPK [Mapview hg19]  HYPK [Mapview hg38]
OMIM612784   
Gene and transcription
Genbank (Entrez)AF049613 AF161485 AK022435 BC019262 BQ478474
RefSeq transcript (Entrez)NM_001199885 NM_016400
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)HYPK
Cluster EST : UnigeneHs.730672 [ NCBI ]
CGAP (NCI)Hs.730672
Alternative Splicing GalleryENSG00000140264
Gene ExpressionHYPK [ NCBI-GEO ]   HYPK [ EBI - ARRAY_EXPRESS ]   HYPK [ SEEK ]   HYPK [ MEM ]
Gene Expression Viewer (FireBrowse)HYPK [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)25764
GTEX Portal (Tissue expression)HYPK
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NX55   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9NX55  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9NX55
Splice isoforms : SwissVarQ9NX55
PhosPhoSitePlusQ9NX55
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)HYPK
DMDM Disease mutations25764
Blocks (Seattle)HYPK
SuperfamilyQ9NX55
Human Protein AtlasENSG00000140264
Peptide AtlasQ9NX55
HPRD13724
IPIIPI00395462   IPI00794053   
Protein Interaction databases
DIP (DOE-UCLA)Q9NX55
IntAct (EBI)Q9NX55
FunCoupENSG00000140264
BioGRIDHYPK
STRING (EMBL)HYPK
ZODIACHYPK
Ontologies - Pathways
QuickGOQ9NX55
Ontology : AmiGOprotein binding  nucleus  nucleoplasm  cytoplasm  microtubule cytoskeleton  negative regulation of apoptotic process  protein complex  protein N-terminus binding  protein stabilization  
Ontology : EGO-EBIprotein binding  nucleus  nucleoplasm  cytoplasm  microtubule cytoskeleton  negative regulation of apoptotic process  protein complex  protein N-terminus binding  protein stabilization  
NDEx NetworkHYPK
Atlas of Cancer Signalling NetworkHYPK
Wikipedia pathwaysHYPK
Orthology - Evolution
OrthoDB25764
GeneTree (enSembl)ENSG00000140264
Phylogenetic Trees/Animal Genes : TreeFamHYPK
HOVERGENQ9NX55
HOGENOMQ9NX55
Homologs : HomoloGeneHYPK
Homology/Alignments : Family Browser (UCSC)HYPK
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerHYPK [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)HYPK
dbVarHYPK
ClinVarHYPK
1000_GenomesHYPK 
Exome Variant ServerHYPK
ExAC (Exome Aggregation Consortium)HYPK (select the gene name)
Genetic variants : HAPMAP25764
Genomic Variants (DGV)HYPK [DGVbeta]
DECIPHERHYPK [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisHYPK 
Mutations
ICGC Data PortalHYPK 
TCGA Data PortalHYPK 
Broad Tumor PortalHYPK
OASIS PortalHYPK [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDHYPK
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch HYPK
DgiDB (Drug Gene Interaction Database)HYPK
DoCM (Curated mutations)HYPK (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)HYPK (select a term)
intoGenHYPK
Cancer3DHYPK(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM612784   
Orphanet
MedgenHYPK
Genetic Testing Registry HYPK
NextProtQ9NX55 [Medical]
TSGene25764
GENETestsHYPK
Target ValidationHYPK
Huge Navigator HYPK [HugePedia]
snp3D : Map Gene to Disease25764
BioCentury BCIQHYPK
ClinGenHYPK
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD25764
Chemical/Pharm GKB GenePA165478509
Clinical trialHYPK
Miscellaneous
canSAR (ICR)HYPK (select the gene name)
Probes
Litterature
PubMed22 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineHYPK
EVEXHYPK
GoPubMedHYPK
iHOPHYPK
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:10:55 CEST 2017

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