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IBA57-AS1 (IBA57 antisense RNA 1 (head to head))

Identity

Alias_namesC1orf148
chromosome 1 open reading frame 148
Alias_symbol (synonym)FLJ32878
Other alias
HGNC (Hugo) IBA57-AS1
LocusID (NCBI) 574432
Atlas_Id 64488
Location 1q42.13  [Link to chromosome band 1q42]
Location_base_pair Starts at 228164086 and ends at 228164848 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)IBA57-AS1   32062
Cards
Entrez_Gene (NCBI)IBA57-AS1  574432  IBA57 antisense RNA 1 (head to head)
AliasesC1orf148
GeneCards (Weizmann)IBA57-AS1
Ensembl hg19 (Hinxton)ENSG00000203684 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000203684 [Gene_View]  chr1:228164086-228164848 [Contig_View]  IBA57-AS1 [Vega]
ICGC DataPortalENSG00000203684
TCGA cBioPortalIBA57-AS1
AceView (NCBI)IBA57-AS1
Genatlas (Paris)IBA57-AS1
WikiGenes574432
SOURCE (Princeton)IBA57-AS1
Genetics Home Reference (NIH)IBA57-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)IBA57-AS1  -     chr1:228164086-228164848 -  1q42.13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)IBA57-AS1  -     1q42.13   [Description]    (hg19-Feb_2009)
EnsemblIBA57-AS1 - 1q42.13 [CytoView hg19]  IBA57-AS1 - 1q42.13 [CytoView hg38]
Mapping of homologs : NCBIIBA57-AS1 [Mapview hg19]  IBA57-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI989571 BX114038
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)IBA57-AS1
Cluster EST : UnigeneHs.568467 [ NCBI ]
CGAP (NCI)Hs.568467
Alternative Splicing GalleryENSG00000203684
Gene ExpressionIBA57-AS1 [ NCBI-GEO ]   IBA57-AS1 [ EBI - ARRAY_EXPRESS ]   IBA57-AS1 [ SEEK ]   IBA57-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)IBA57-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)574432
GTEX Portal (Tissue expression)IBA57-AS1
Protein : pattern, domain, 3D structure
UniProt/SwissProtB1ANH7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtB1ANH7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProB1ANH7
Splice isoforms : SwissVarB1ANH7
PhosPhoSitePlusB1ANH7
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)IBA57-AS1
DMDM Disease mutations574432
Blocks (Seattle)IBA57-AS1
SuperfamilyB1ANH7
Human Protein AtlasENSG00000203684
Peptide AtlasB1ANH7
IPIIPI00514994   
Protein Interaction databases
DIP (DOE-UCLA)B1ANH7
IntAct (EBI)B1ANH7
FunCoupENSG00000203684
BioGRIDIBA57-AS1
STRING (EMBL)IBA57-AS1
ZODIACIBA57-AS1
Ontologies - Pathways
QuickGOB1ANH7
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkIBA57-AS1
Atlas of Cancer Signalling NetworkIBA57-AS1
Wikipedia pathwaysIBA57-AS1
Orthology - Evolution
OrthoDB574432
GeneTree (enSembl)ENSG00000203684
Phylogenetic Trees/Animal Genes : TreeFamIBA57-AS1
HOVERGENB1ANH7
HOGENOMB1ANH7
Homologs : HomoloGeneIBA57-AS1
Homology/Alignments : Family Browser (UCSC)IBA57-AS1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerIBA57-AS1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)IBA57-AS1
dbVarIBA57-AS1
ClinVarIBA57-AS1
1000_GenomesIBA57-AS1 
Exome Variant ServerIBA57-AS1
ExAC (Exome Aggregation Consortium)IBA57-AS1 (select the gene name)
Genetic variants : HAPMAP574432
Genomic Variants (DGV)IBA57-AS1 [DGVbeta]
DECIPHERIBA57-AS1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisIBA57-AS1 
Mutations
ICGC Data PortalIBA57-AS1 
TCGA Data PortalIBA57-AS1 
Broad Tumor PortalIBA57-AS1
OASIS PortalIBA57-AS1 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDIBA57-AS1
BioMutasearch IBA57-AS1
DgiDB (Drug Gene Interaction Database)IBA57-AS1
DoCM (Curated mutations)IBA57-AS1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)IBA57-AS1 (select a term)
intoGenIBA57-AS1
Cancer3DIBA57-AS1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenIBA57-AS1
Genetic Testing Registry IBA57-AS1
NextProtB1ANH7 [Medical]
TSGene574432
GENETestsIBA57-AS1
Target ValidationIBA57-AS1
Huge Navigator IBA57-AS1 [HugePedia]
snp3D : Map Gene to Disease574432
BioCentury BCIQIBA57-AS1
ClinGenIBA57-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD574432
Chemical/Pharm GKB GenePA142672465
Clinical trialIBA57-AS1
Miscellaneous
canSAR (ICR)IBA57-AS1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineIBA57-AS1
EVEXIBA57-AS1
GoPubMedIBA57-AS1
iHOPIBA57-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:10:56 CEST 2017

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