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ID2B (inhibitor of DNA binding 2B, HLH protein (pseudogene))

Identity

Alias_namesinhibitor of DNA binding 2B, dominant negative helix-loop-helix protein
inhibitor of DNA binding 2B, dominant negative helix-loop-helix protein (pseudogene)
Other alias-
HGNC (Hugo) ID2B
LocusID (NCBI) 84099
Atlas_Id 46726
Location 3p14.2  [Link to chromosome band 3p14]
Location_base_pair Starts at 62123492 and ends at 62124718 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)ID2B   30656
Cards
Entrez_Gene (NCBI)ID2B  84099  inhibitor of DNA binding 2B, HLH protein (pseudogene)
Aliases
GeneCards (Weizmann)ID2B
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr3:62123492-62124718 [Contig_View]  ID2B [Vega]
TCGA cBioPortalID2B
AceView (NCBI)ID2B
Genatlas (Paris)ID2B
WikiGenes84099
SOURCE (Princeton)ID2B
Genetics Home Reference (NIH)ID2B
Genomic and cartography
GoldenPath hg38 (UCSC)ID2B  -     chr3:62123492-62124718 -  3p14.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ID2B  -     3p14.2   [Description]    (hg19-Feb_2009)
EnsemblID2B - 3p14.2 [CytoView hg19]  ID2B - 3p14.2 [CytoView hg38]
Mapping of homologs : NCBIID2B [Mapview hg19]  ID2B [Mapview hg38]
Gene and transcription
Genbank (Entrez)M96843
RefSeq transcript (Entrez)NM_001039082
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ID2B
Cluster EST : UnigeneHs.591670 [ NCBI ]
CGAP (NCI)Hs.591670
Gene ExpressionID2B [ NCBI-GEO ]   ID2B [ EBI - ARRAY_EXPRESS ]   ID2B [ SEEK ]   ID2B [ MEM ]
Gene Expression Viewer (FireBrowse)ID2B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84099
GTEX Portal (Tissue expression)ID2B
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ14602   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ14602  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ14602
Splice isoforms : SwissVarQ14602
PhosPhoSitePlusQ14602
Domains : Interpro (EBI)DNA-bd_prot-inh   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ID2B
DMDM Disease mutations84099
Blocks (Seattle)ID2B
SuperfamilyQ14602
Peptide AtlasQ14602
IPIIPI00929285   
Protein Interaction databases
DIP (DOE-UCLA)Q14602
IntAct (EBI)Q14602
BioGRIDID2B
STRING (EMBL)ID2B
ZODIACID2B
Ontologies - Pathways
QuickGOQ14602
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkID2B
Atlas of Cancer Signalling NetworkID2B
Wikipedia pathwaysID2B
Orthology - Evolution
OrthoDB84099
Phylogenetic Trees/Animal Genes : TreeFamID2B
HOVERGENQ14602
HOGENOMQ14602
Homologs : HomoloGeneID2B
Homology/Alignments : Family Browser (UCSC)ID2B
Gene fusions - Rearrangements
Tumor Fusion PortalID2B
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerID2B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ID2B
dbVarID2B
ClinVarID2B
1000_GenomesID2B 
Exome Variant ServerID2B
ExAC (Exome Aggregation Consortium)
Genetic variants : HAPMAP84099
Genomic Variants (DGV)ID2B [DGVbeta]
DECIPHERID2B [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisID2B 
Mutations
ICGC Data PortalID2B 
TCGA Data PortalID2B 
Broad Tumor PortalID2B
OASIS PortalID2B [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICID2B  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDID2B
BioMutasearch ID2B
DgiDB (Drug Gene Interaction Database)ID2B
DoCM (Curated mutations)ID2B (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ID2B (select a term)
intoGenID2B
Cancer3DID2B(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETID2B
MedgenID2B
Genetic Testing Registry ID2B
NextProtQ14602 [Medical]
TSGene84099
GENETestsID2B
Target ValidationID2B
Huge Navigator ID2B [HugePedia]
snp3D : Map Gene to Disease84099
BioCentury BCIQID2B
ClinGenID2B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD84099
Chemical/Pharm GKB GenePA134980624
Clinical trialID2B
Miscellaneous
canSAR (ICR)ID2B (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineID2B
EVEXID2B
GoPubMedID2B
iHOPID2B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 14:17:11 CET 2017

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