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IDH3B (isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit beta)

Identity

Alias (NCBI)RP46
HGNC (Hugo) IDH3B
HGNC Alias symbRP46
HGNC Previous nameisocitrate dehydrogenase 3 (NAD+) beta
 isocitrate dehydrogenase (NAD(+)) 3 beta
LocusID (NCBI) 3420
Atlas_Id 53966
Location 20p13  [Link to chromosome band 20p13]
Location_base_pair Starts at 2658395 and ends at 2664216 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
IDH3B (20p13)::IDH3B (20p13)IDH3B (20p13)::JUP (17q21.2)MYT1L (2p25.3)::IDH3B (20p13)
PSAP (10q22.1)::IDH3B (20p13)UBAC2 (13q32.3)::IDH3B (20p13)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)IDH3B   5385
Cards
Entrez_Gene (NCBI)IDH3B    isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit beta
AliasesRP46
GeneCards (Weizmann)IDH3B
Ensembl hg19 (Hinxton)ENSG00000101365 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000101365 [Gene_View]  ENSG00000101365 [Sequence]  chr20:2658395-2664216 [Contig_View]  IDH3B [Vega]
ICGC DataPortalENSG00000101365
TCGA cBioPortalIDH3B
AceView (NCBI)IDH3B
Genatlas (Paris)IDH3B
SOURCE (Princeton)IDH3B
Genetics Home Reference (NIH)IDH3B
Genomic and cartography
GoldenPath hg38 (UCSC)IDH3B  -     chr20:2658395-2664216 -  20p13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)IDH3B  -     20p13   [Description]    (hg19-Feb_2009)
GoldenPathIDH3B - 20p13 [CytoView hg19]  IDH3B - 20p13 [CytoView hg38]
ImmunoBaseENSG00000101365
Genome Data Viewer NCBIIDH3B [Mapview hg19]  
OMIM604526   612572   
Gene and transcription
Genbank (Entrez)AK001905 AK300485 AK309488 AK315641 AL050094
RefSeq transcript (Entrez)NM_001258384 NM_001330763 NM_006899 NM_174855 NM_174856
Consensus coding sequences : CCDS (NCBI)IDH3B
Gene ExpressionIDH3B [ NCBI-GEO ]   IDH3B [ EBI - ARRAY_EXPRESS ]   IDH3B [ SEEK ]   IDH3B [ MEM ]
Gene Expression Viewer (FireBrowse)IDH3B [ Firebrowse - Broad ]
GenevisibleExpression of IDH3B in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)3420
GTEX Portal (Tissue expression)IDH3B
Human Protein AtlasENSG00000101365-IDH3B [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)IDH3B
Human Protein Atlas [tissue]ENSG00000101365-IDH3B [tissue]
HPRD05163
Protein Interaction databases
BioGRIDIDH3B
STRING (EMBL)IDH3B
ZODIACIDH3B
Ontologies - Pathways
Litterature
PubMed59 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXIDH3B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Sun Jan 16 18:15:02 CET 2022

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