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IDNK (IDNK, gluconokinase)

Identity

Alias_namesC9orf103
chromosome 9 open reading frame 103
idnK, gluconokinase homolog (E. coli)
Alias_symbol (synonym)bA522I20.2
hGntK
Other alias
HGNC (Hugo) IDNK
LocusID (NCBI) 414328
Atlas_Id 64500
Location 9q21.32  [Link to chromosome band 9q21]
Location_base_pair Starts at 83623049 and ends at 83644130 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)IDNK   31367
Cards
Entrez_Gene (NCBI)IDNK  414328  IDNK, gluconokinase
AliasesC9orf103; bA522I20.2; hGntK
GeneCards (Weizmann)IDNK
Ensembl hg19 (Hinxton)ENSG00000148057 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000148057 [Gene_View]  chr9:83623049-83644130 [Contig_View]  IDNK [Vega]
ICGC DataPortalENSG00000148057
TCGA cBioPortalIDNK
AceView (NCBI)IDNK
Genatlas (Paris)IDNK
WikiGenes414328
SOURCE (Princeton)IDNK
Genetics Home Reference (NIH)IDNK
Genomic and cartography
GoldenPath hg38 (UCSC)IDNK  -     chr9:83623049-83644130 +  9q21.32   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)IDNK  -     9q21.32   [Description]    (hg19-Feb_2009)
EnsemblIDNK - 9q21.32 [CytoView hg19]  IDNK - 9q21.32 [CytoView hg38]
Mapping of homologs : NCBIIDNK [Mapview hg19]  IDNK [Mapview hg38]
OMIM611343   
Gene and transcription
Genbank (Entrez)AF086281 AY615889 BC036421 BC045782 BC140077
RefSeq transcript (Entrez)NM_001001551 NM_001190727 NM_001256915
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)IDNK
Cluster EST : UnigeneHs.530261 [ NCBI ]
CGAP (NCI)Hs.530261
Alternative Splicing GalleryENSG00000148057
Gene ExpressionIDNK [ NCBI-GEO ]   IDNK [ EBI - ARRAY_EXPRESS ]   IDNK [ SEEK ]   IDNK [ MEM ]
Gene Expression Viewer (FireBrowse)IDNK [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)414328
GTEX Portal (Tissue expression)IDNK
Human Protein AtlasENSG00000148057-IDNK [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ5T6J7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ5T6J7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ5T6J7
Splice isoforms : SwissVarQ5T6J7
Catalytic activity : Enzyme2.7.1.12 [ Enzyme-Expasy ]   2.7.1.122.7.1.12 [ IntEnz-EBI ]   2.7.1.12 [ BRENDA ]   2.7.1.12 [ KEGG ]   
PhosPhoSitePlusQ5T6J7
Domains : Interpro (EBI)P-loop_NTPase    Shikimate/glucono_kinase    Therm_gnt_kin   
Domain families : Pfam (Sanger)SKI (PF01202)   
Domain families : Pfam (NCBI)pfam01202   
Conserved Domain (NCBI)IDNK
DMDM Disease mutations414328
Blocks (Seattle)IDNK
SuperfamilyQ5T6J7
Human Protein Atlas [tissue]ENSG00000148057-IDNK [tissue]
Peptide AtlasQ5T6J7
HPRD16671
IPIIPI00418496   IPI00853478   IPI00884990   IPI00977624   IPI00984461   IPI00513818   
Protein Interaction databases
DIP (DOE-UCLA)Q5T6J7
IntAct (EBI)Q5T6J7
FunCoupENSG00000148057
BioGRIDIDNK
STRING (EMBL)IDNK
ZODIACIDNK
Ontologies - Pathways
QuickGOQ5T6J7
Ontology : AmiGOmolecular_function  ATP binding  biological_process  phosphorylation  D-gluconate catabolic process  gluconokinase activity  
Ontology : EGO-EBImolecular_function  ATP binding  biological_process  phosphorylation  D-gluconate catabolic process  gluconokinase activity  
NDEx NetworkIDNK
Atlas of Cancer Signalling NetworkIDNK
Wikipedia pathwaysIDNK
Orthology - Evolution
OrthoDB414328
GeneTree (enSembl)ENSG00000148057
Phylogenetic Trees/Animal Genes : TreeFamIDNK
HOVERGENQ5T6J7
HOGENOMQ5T6J7
Homologs : HomoloGeneIDNK
Homology/Alignments : Family Browser (UCSC)IDNK
Gene fusions - Rearrangements
Tumor Fusion PortalIDNK
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerIDNK [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)IDNK
dbVarIDNK
ClinVarIDNK
1000_GenomesIDNK 
Exome Variant ServerIDNK
ExAC (Exome Aggregation Consortium)ENSG00000148057
GNOMAD BrowserENSG00000148057
Genetic variants : HAPMAP414328
Genomic Variants (DGV)IDNK [DGVbeta]
DECIPHERIDNK [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisIDNK 
Mutations
ICGC Data PortalIDNK 
TCGA Data PortalIDNK 
Broad Tumor PortalIDNK
OASIS PortalIDNK [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICIDNK  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDIDNK
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch IDNK
DgiDB (Drug Gene Interaction Database)IDNK
DoCM (Curated mutations)IDNK (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)IDNK (select a term)
intoGenIDNK
Cancer3DIDNK(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM611343   
Orphanet
DisGeNETIDNK
MedgenIDNK
Genetic Testing Registry IDNK
NextProtQ5T6J7 [Medical]
TSGene414328
GENETestsIDNK
Target ValidationIDNK
Huge Navigator IDNK [HugePedia]
snp3D : Map Gene to Disease414328
BioCentury BCIQIDNK
ClinGenIDNK
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD414328
Chemical/Pharm GKB GenePA134880846
Clinical trialIDNK
Miscellaneous
canSAR (ICR)IDNK (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineIDNK
EVEXIDNK
GoPubMedIDNK
iHOPIDNK
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:19:53 CET 2017

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