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IER3-AS1 (IER3 antisense RNA 1)

Identity

Alias (NCBI)-
HGNC (Hugo) IER3-AS1
LocusID (NCBI) 105379695
Atlas_Id 80529
Location 6p21.33  [Link to chromosome band 6p21]
Location_base_pair Starts at 30742963 and ends at 30743673 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)IER3-AS1   53629
Cards
Entrez_Gene (NCBI)IER3-AS1  105379695  IER3 antisense RNA 1
Aliases
GeneCards (Weizmann)IER3-AS1
Ensembl hg19 (Hinxton)ENSG00000272273 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000272273 [Gene_View]  ENSG00000272273 [Sequence]  chr6:30742963-30743673 [Contig_View]  IER3-AS1 [Vega]
ICGC DataPortalENSG00000272273
TCGA cBioPortalIER3-AS1
AceView (NCBI)IER3-AS1
Genatlas (Paris)IER3-AS1
WikiGenes105379695
SOURCE (Princeton)IER3-AS1
Genetics Home Reference (NIH)IER3-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)IER3-AS1  -     chr6:30742963-30743673 +  6p21.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)IER3-AS1  -     6p21.33   [Description]    (hg19-Feb_2009)
GoldenPathIER3-AS1 - 6p21.33 [CytoView hg19]  IER3-AS1 - 6p21.33 [CytoView hg38]
ImmunoBaseENSG00000272273
genome Data Viewer NCBIIER3-AS1 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AA431547 CD641745
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000006 NT_113891 NT_167245 NT_167246 NT_167248 NT_167249
Consensus coding sequences : CCDS (NCBI)IER3-AS1
Alternative Splicing GalleryENSG00000272273
Gene ExpressionIER3-AS1 [ NCBI-GEO ]   IER3-AS1 [ EBI - ARRAY_EXPRESS ]   IER3-AS1 [ SEEK ]   IER3-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)IER3-AS1 [ Firebrowse - Broad ]
GenevisibleExpression of IER3-AS1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)105379695
GTEX Portal (Tissue expression)IER3-AS1
Human Protein AtlasENSG00000272273-IER3-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)IER3-AS1
DMDM Disease mutations105379695
Blocks (Seattle)IER3-AS1
Human Protein Atlas [tissue]ENSG00000272273-IER3-AS1 [tissue]
Protein Interaction databases
FunCoupENSG00000272273
BioGRIDIER3-AS1
STRING (EMBL)IER3-AS1
ZODIACIER3-AS1
Ontologies - Pathways
Huge Navigator IER3-AS1 [HugePedia]
snp3D : Map Gene to Disease105379695
BioCentury BCIQIER3-AS1
ClinGenIER3-AS1
Clinical trials, drugs, therapy
Protein Interactions : CTD105379695
Clinical trialIER3-AS1
Miscellaneous
canSAR (ICR)IER3-AS1 (select the gene name)
HarmonizomeIER3-AS1
DataMed IndexIER3-AS1
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineIER3-AS1
EVEXIER3-AS1
GoPubMedIER3-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Sat Aug 22 19:13:58 CEST 2020

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