| Nomenclature |
HGNC (Hugo) | IFI30 5398 |
| Cards |
Entrez_Gene (NCBI) | IFI30 IFI30 lysosomal thiol reductase |
Aliases | GILT; IFI-30; IP-30; IP30 |
GeneCards (Weizmann) | IFI30 |
Ensembl hg19 (Hinxton) | ENSG00000216490 [Gene_View] |
Ensembl hg38 (Hinxton) | ENSG00000216490 [Gene_View]  ENSG00000216490 [Sequence] chr19:18173813-18178117 [Contig_View] IFI30 [Vega] |
ICGC DataPortal | ENSG00000216490 |
TCGA cBioPortal | IFI30 |
AceView (NCBI) | IFI30 |
Genatlas (Paris) | IFI30 |
SOURCE (Princeton) | IFI30 |
Genetics Home Reference (NIH) | IFI30 |
| Genomic and cartography |
GoldenPath hg38 (UCSC) | IFI30 - chr19:18173813-18178117 + 19p13.11 [Description] (hg38-Dec_2013) |
GoldenPath hg19 (UCSC) | IFI30 - 19p13.11 [Description] (hg19-Feb_2009) |
GoldenPath | IFI30 - 19p13.11 [CytoView hg19] IFI30 - 19p13.11 [CytoView hg38] |
ImmunoBase | ENSG00000216490 |
genome Data Viewer NCBI | IFI30 [Mapview hg19] |
OMIM | 604664 |
| Gene and transcription |
Genbank (Entrez) | AB049659 AF097362 AF401212 AI022513 AK123477 |
RefSeq transcript (Entrez) | NM_006332 |
RefSeq genomic (Entrez) | |
Consensus coding sequences : CCDS (NCBI) | IFI30 |
Alternative Splicing Gallery | ENSG00000216490 |
Gene Expression | IFI30 [ NCBI-GEO ] IFI30 [ EBI - ARRAY_EXPRESS ]
IFI30 [ SEEK ] IFI30 [ MEM ] |
Gene Expression Viewer (FireBrowse) | IFI30 [ Firebrowse - Broad ] |
Genevisible | Expression of IFI30 in : [tissues]  [cell-lines]  [cancer]  [perturbations]   |
BioGPS (Tissue expression) | 10437 |
GTEX Portal (Tissue expression) | IFI30 |
Human Protein Atlas | ENSG00000216490-IFI30 [pathology] [cell] [tissue] |
| Protein : pattern, domain, 3D structure |
UniProt/SwissProt | P13284 [function] [subcellular_location] [family_and_domains] [pathology_and_biotech] [ptm_processing] [expression] [interaction] |
NextProt | P13284 [Sequence] [Exons] [Medical] [Publications] |
With graphics : InterPro | P13284 |
Splice isoforms : SwissVar | P13284 |
PhosPhoSitePlus | P13284 |
Domains : Interpro (EBI) | Interferon-induced_GILT |
Domain families : Pfam (Sanger) | GILT (PF03227) |
Domain families : Pfam (NCBI) | pfam03227 |
Conserved Domain (NCBI) | IFI30 |
Blocks (Seattle) | IFI30 |
Superfamily | P13284 |
Human Protein Atlas [tissue] | ENSG00000216490-IFI30 [tissue] |
Peptide Atlas | P13284 |
HPRD | 05234 |
IPI | IPI00007853 IPI00816038 IPI00871537 |
| Protein Interaction databases |
DIP (DOE-UCLA) | P13284 |
IntAct (EBI) | P13284 |
BioGRID | IFI30 |
STRING (EMBL) | IFI30 |
ZODIAC | IFI30 |
| Ontologies - Pathways |
QuickGO | P13284 |
Ontology : AmiGO | protein binding extracellular region lysosome lysosome cytosol oxidoreductase activity oxidoreductase activity, acting on a sulfur group of donors oxidoreductase activity, acting on a sulfur group of donors oxidoreductase activity, acting on a sulfur group of donors antigen processing and presentation of exogenous peptide antigen via MHC class II cell junction antigen processing and presentation of exogenous peptide antigen via MHC class I lysosomal lumen intracellular membrane-bounded organelle oxidation-reduction process interferon-gamma-mediated signaling pathway |
Ontology : EGO-EBI | protein binding extracellular region lysosome lysosome cytosol oxidoreductase activity oxidoreductase activity, acting on a sulfur group of donors oxidoreductase activity, acting on a sulfur group of donors oxidoreductase activity, acting on a sulfur group of donors antigen processing and presentation of exogenous peptide antigen via MHC class II cell junction antigen processing and presentation of exogenous peptide antigen via MHC class I lysosomal lumen intracellular membrane-bounded organelle oxidation-reduction process interferon-gamma-mediated signaling pathway |
Pathways : KEGG | Antigen processing and presentation |
NDEx Network | IFI30 |
Atlas of Cancer Signalling Network | IFI30 |
Wikipedia pathways | IFI30 |
| Orthology - Evolution |
OrthoDB | 10437 |
GeneTree (enSembl) | ENSG00000216490 |
Phylogenetic Trees/Animal Genes : TreeFam | IFI30 |
HOGENOM | P13284 |
Homologs : HomoloGene | IFI30 |
Homology/Alignments : Family Browser (UCSC) | IFI30 |
| Gene fusions - Rearrangements |
Fusion : Quiver | IFI30 |
| Polymorphisms : SNP and Copy number variants |
NCBI Variation Viewer | IFI30 [hg38] |
dbVar | IFI30 |
ClinVar | IFI30 |
Monarch | IFI30 |
1000_Genomes | IFI30 |
Exome Variant Server | IFI30 |
GNOMAD Browser | ENSG00000216490 |
Varsome Browser | IFI30 |
Genomic Variants (DGV) | IFI30 [DGVbeta] |
DECIPHER | IFI30 [patients] [syndromes] [variants] [genes] |
CONAN: Copy Number Analysis | IFI30 |
| Mutations |
ICGC Data Portal | IFI30 |
TCGA Data Portal | IFI30 |
Broad Tumor Portal | IFI30 |
OASIS Portal | IFI30 [ Somatic mutations - Copy number] |
Somatic Mutations in Cancer : COSMIC | IFI30 [overview] [genome browser] [tissue] [distribution] |
Somatic Mutations in Cancer : COSMIC3D | IFI30 |
Mutations and Diseases : HGMD | IFI30 |
LOVD (Leiden Open Variation Database) | Whole genome datasets |
LOVD (Leiden Open Variation Database) | LOVD - Leiden Open Variation Database |
LOVD (Leiden Open Variation Database) | LOVD 3.0 shared installation |
BioMuta | search IFI30 |
DgiDB (Drug Gene Interaction Database) | IFI30 |
DoCM (Curated mutations) | IFI30 (select the gene name) |
CIViC (Clinical Interpretations of Variants in Cancer) | IFI30 (select a term) |
intoGen | IFI30 |
Cancer3D | IFI30(select the gene name) |
Impact of mutations | [PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser] |
| Diseases |
---|
OMIM | 604664 |
Orphanet | |
DisGeNET | IFI30 |
Medgen | IFI30 |
Genetic Testing Registry | IFI30
|
NextProt | P13284 [Medical] |
GENETests | IFI30 |
Target Validation | IFI30 |
Huge Navigator |
IFI30 [HugePedia] |
ClinGen | IFI30 |
| Clinical trials, drugs, therapy |
---|
MyCancerGenome | IFI30 |
Protein Interactions : CTD | |
Pharm GKB Gene | PA29644 |
Pharos | P13284 |
Clinical trial | IFI30 |
| Miscellaneous |
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canSAR (ICR) | IFI30 (select the gene name) |
Harmonizome | IFI30 |
DataMed Index | IFI30 |
| Probes |
---|
| Litterature |
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PubMed | 33 Pubmed reference(s) in Entrez |
GeneRIFs | Gene References Into Functions (Entrez) |
EVEX | IFI30 |