| Nomenclature |
|---|
| HGNC (Hugo) | IFI30 5398 |
| Cards |
|---|
| Entrez_Gene (NCBI) | IFI30 IFI30 lysosomal thiol reductase |
| Aliases | GILT; IFI-30; IP-30; IP30 |
| GeneCards (Weizmann) | IFI30 |
| Ensembl hg19 (Hinxton) | ENSG00000216490 [Gene_View] |
| Ensembl hg38 (Hinxton) | ENSG00000216490 [Gene_View] ENSG00000216490 [Sequence] chr19:18173813-18178117 [Contig_View] IFI30 [Vega] |
| ICGC DataPortal | ENSG00000216490 |
| TCGA cBioPortal | IFI30 |
| AceView (NCBI) | IFI30 |
| Genatlas (Paris) | IFI30 |
| SOURCE (Princeton) | IFI30 |
| Genetics Home Reference (NIH) | IFI30 |
| Genomic and cartography |
|---|
| GoldenPath hg38 (UCSC) | IFI30 - chr19:18173813-18178117 + 19p13.11 [Description] (hg38-Dec_2013) |
| GoldenPath hg19 (UCSC) | IFI30 - 19p13.11 [Description] (hg19-Feb_2009) |
| GoldenPath | IFI30 - 19p13.11 [CytoView hg19] IFI30 - 19p13.11 [CytoView hg38] |
| ImmunoBase | ENSG00000216490 |
| genome Data Viewer NCBI | IFI30 [Mapview hg19] |
| OMIM | 604664 |
| Gene and transcription |
|---|
| Genbank (Entrez) | AB049659 AF097362 AF401212 AI022513 AK123477 |
| RefSeq transcript (Entrez) | NM_006332 |
| RefSeq genomic (Entrez) | |
| Consensus coding sequences : CCDS (NCBI) | IFI30 |
| Alternative Splicing Gallery | ENSG00000216490 |
| Gene Expression | IFI30 [ NCBI-GEO ] IFI30 [ EBI - ARRAY_EXPRESS ]
IFI30 [ SEEK ] IFI30 [ MEM ] |
| Gene Expression Viewer (FireBrowse) | IFI30 [ Firebrowse - Broad ] |
| Genevisible | Expression of IFI30 in : [tissues] [cell-lines] [cancer] [perturbations] |
| BioGPS (Tissue expression) | 10437 |
| GTEX Portal (Tissue expression) | IFI30 |
| Human Protein Atlas | ENSG00000216490-IFI30 [pathology] [cell] [tissue] |
| Protein : pattern, domain, 3D structure |
|---|
| UniProt/SwissProt | P13284 [function] [subcellular_location] [family_and_domains] [pathology_and_biotech] [ptm_processing] [expression] [interaction] |
| NextProt | P13284 [Sequence] [Exons] [Medical] [Publications] |
| With graphics : InterPro | P13284 |
| Splice isoforms : SwissVar | P13284 |
| PhosPhoSitePlus | P13284 |
| Domains : Interpro (EBI) | Interferon-induced_GILT |
| Domain families : Pfam (Sanger) | GILT (PF03227) |
| Domain families : Pfam (NCBI) | pfam03227 |
| Conserved Domain (NCBI) | IFI30 |
| Blocks (Seattle) | IFI30 |
| Superfamily | P13284 |
| Human Protein Atlas [tissue] | ENSG00000216490-IFI30 [tissue] |
| Peptide Atlas | P13284 |
| HPRD | 05234 |
| IPI | IPI00007853 IPI00816038 IPI00871537 |
| Protein Interaction databases |
|---|
| DIP (DOE-UCLA) | P13284 |
| IntAct (EBI) | P13284 |
| BioGRID | IFI30 |
| STRING (EMBL) | IFI30 |
| ZODIAC | IFI30 |
| Ontologies - Pathways |
|---|
| QuickGO | P13284 |
| Ontology : AmiGO | protein binding extracellular region lysosome lysosome cytosol oxidoreductase activity oxidoreductase activity, acting on a sulfur group of donors oxidoreductase activity, acting on a sulfur group of donors oxidoreductase activity, acting on a sulfur group of donors antigen processing and presentation of exogenous peptide antigen via MHC class II cell junction antigen processing and presentation of exogenous peptide antigen via MHC class I lysosomal lumen intracellular membrane-bounded organelle oxidation-reduction process interferon-gamma-mediated signaling pathway |
| Ontology : EGO-EBI | protein binding extracellular region lysosome lysosome cytosol oxidoreductase activity oxidoreductase activity, acting on a sulfur group of donors oxidoreductase activity, acting on a sulfur group of donors oxidoreductase activity, acting on a sulfur group of donors antigen processing and presentation of exogenous peptide antigen via MHC class II cell junction antigen processing and presentation of exogenous peptide antigen via MHC class I lysosomal lumen intracellular membrane-bounded organelle oxidation-reduction process interferon-gamma-mediated signaling pathway |
| Pathways : KEGG | Antigen processing and presentation |
| NDEx Network | IFI30 |
| Atlas of Cancer Signalling Network | IFI30 |
| Wikipedia pathways | IFI30 |
| Orthology - Evolution |
|---|
| OrthoDB | 10437 |
| GeneTree (enSembl) | ENSG00000216490 |
| Phylogenetic Trees/Animal Genes : TreeFam | IFI30 |
| HOGENOM | P13284 |
| Homologs : HomoloGene | IFI30 |
| Homology/Alignments : Family Browser (UCSC) | IFI30 |
| Gene fusions - Rearrangements |
|---|
| Fusion : Quiver | IFI30 |
| Polymorphisms : SNP and Copy number variants |
|---|
| NCBI Variation Viewer | IFI30 [hg38] |
| dbVar | IFI30 |
| ClinVar | IFI30 |
| Monarch | IFI30 |
| 1000_Genomes | IFI30 |
| Exome Variant Server | IFI30 |
| GNOMAD Browser | ENSG00000216490 |
| Varsome Browser | IFI30 |
| Genomic Variants (DGV) | IFI30 [DGVbeta] |
| DECIPHER | IFI30 [patients] [syndromes] [variants] [genes] |
| CONAN: Copy Number Analysis | IFI30 |
| Mutations |
|---|
| ICGC Data Portal | IFI30 |
| TCGA Data Portal | IFI30 |
| Broad Tumor Portal | IFI30 |
| OASIS Portal | IFI30 [ Somatic mutations - Copy number] |
| Somatic Mutations in Cancer : COSMIC | IFI30 [overview] [genome browser] [tissue] [distribution] |
| Somatic Mutations in Cancer : COSMIC3D | IFI30 |
| Mutations and Diseases : HGMD | IFI30 |
| LOVD (Leiden Open Variation Database) | Whole genome datasets |
| LOVD (Leiden Open Variation Database) | LOVD - Leiden Open Variation Database |
| LOVD (Leiden Open Variation Database) | LOVD 3.0 shared installation |
| BioMuta | search IFI30 |
| DgiDB (Drug Gene Interaction Database) | IFI30 |
| DoCM (Curated mutations) | IFI30 (select the gene name) |
| CIViC (Clinical Interpretations of Variants in Cancer) | IFI30 (select a term) |
| intoGen | IFI30 |
| Cancer3D | IFI30(select the gene name) |
| Impact of mutations | [PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser] |
| Diseases |
|---|
| OMIM | 604664 |
| Orphanet | |
| DisGeNET | IFI30 |
| Medgen | IFI30 |
| Genetic Testing Registry | IFI30
|
| NextProt | P13284 [Medical] |
| GENETests | IFI30 |
| Target Validation | IFI30 |
| Huge Navigator |
IFI30 [HugePedia] |
| ClinGen | IFI30 |
| Clinical trials, drugs, therapy |
|---|
| MyCancerGenome | IFI30 |
| Protein Interactions : CTD | |
| Pharm GKB Gene | PA29644 |
| Pharos | P13284 |
| Clinical trial | IFI30 |
| Miscellaneous |
|---|
| canSAR (ICR) | IFI30 (select the gene name) |
| Harmonizome | IFI30 |
| DataMed Index | IFI30 |
| Probes |
|---|
| Litterature |
|---|
| PubMed | 33 Pubmed reference(s) in Entrez |
| GeneRIFs | Gene References Into Functions (Entrez) |
| EVEX | IFI30 |
