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IFITM4P (interferon induced transmembrane protein 4 pseudogene)

Identity

Alias_symbol (synonym)dJ377H14.5
Other alias
HGNC (Hugo) IFITM4P
LocusID (NCBI) 340198
Atlas_Id 64512
Location 6p22.1  [Link to chromosome band 6p22]
Location_base_pair Starts at 29750807 and ends at 29751148 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)IFITM4P   21669
Cards
Entrez_Gene (NCBI)IFITM4P  340198  interferon induced transmembrane protein 4 pseudogene
AliasesdJ377H14.5
GeneCards (Weizmann)IFITM4P
Ensembl hg19 (Hinxton)ENSG00000235821 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000235821 [Gene_View]  chr6:29750807-29751148 [Contig_View]  IFITM4P [Vega]
ICGC DataPortalENSG00000235821
TCGA cBioPortalIFITM4P
AceView (NCBI)IFITM4P
Genatlas (Paris)IFITM4P
WikiGenes340198
SOURCE (Princeton)IFITM4P
Genetics Home Reference (NIH)IFITM4P
Genomic and cartography
GoldenPath hg38 (UCSC)IFITM4P  -     chr6:29750807-29751148 -  6p22.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)IFITM4P  -     6p22.1   [Description]    (hg19-Feb_2009)
EnsemblIFITM4P - 6p22.1 [CytoView hg19]  IFITM4P - 6p22.1 [CytoView hg38]
Mapping of homologs : NCBIIFITM4P [Mapview hg19]  IFITM4P [Mapview hg38]
Gene and transcription
Genbank (Entrez)DB311150
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000006 NC_018917 NT_113891 NT_167245 NT_167246 NT_167247 NT_167248 NT_167249
Consensus coding sequences : CCDS (NCBI)IFITM4P
Cluster EST : UnigeneHs.450189 [ NCBI ]
CGAP (NCI)Hs.450189
Alternative Splicing GalleryENSG00000235821
Gene ExpressionIFITM4P [ NCBI-GEO ]   IFITM4P [ EBI - ARRAY_EXPRESS ]   IFITM4P [ SEEK ]   IFITM4P [ MEM ]
Gene Expression Viewer (FireBrowse)IFITM4P [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)340198
GTEX Portal (Tissue expression)IFITM4P
Human Protein AtlasENSG00000235821-IFITM4P [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)IFITM4P
DMDM Disease mutations340198
Blocks (Seattle)IFITM4P
Human Protein Atlas [tissue]ENSG00000235821-IFITM4P [tissue]
Protein Interaction databases
FunCoupENSG00000235821
BioGRIDIFITM4P
STRING (EMBL)IFITM4P
ZODIACIFITM4P
Ontologies - Pathways
Huge Navigator IFITM4P [HugePedia]
snp3D : Map Gene to Disease340198
BioCentury BCIQIFITM4P
ClinGenIFITM4P
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD340198
Chemical/Pharm GKB GenePA134944555
Clinical trialIFITM4P
Miscellaneous
canSAR (ICR)IFITM4P (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineIFITM4P
EVEXIFITM4P
GoPubMedIFITM4P
iHOPIFITM4P
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri Feb 23 18:21:51 CET 2018

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