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IFN1@ (interferon, type 1, cluster)

Identity

Other aliasIFNA
HGNC (Hugo) -
LocusID (NCBI) 3438
Atlas_Id 49725
Location 9p21.3  [Link to chromosome band 9p21]
Location_base_pair Starts at 21077106 and ends at 21482313 bp from pter
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)IFN1@  3438  interferon, type 1, cluster
AliasesIFNA
GeneCards (Weizmann)IFN1@
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr9:21077106-21482313 [Contig_View]  IFN1@ [Vega]
TCGA cBioPortalIFN1@
AceView (NCBI)IFN1@
Genatlas (Paris)IFN1@
WikiGenes3438
SOURCE (Princeton)IFN1@
Genetics Home Reference (NIH)IFN1@
Genomic and cartography
GoldenPath hg38 (UCSC)IFN1@  -     chr9:21077106-21482313 9p21.3  hg38-Dec_2013   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)IFN1@  -     hg38-Dec_2013   [Description]    (hg19-Feb_2009)
EnsemblIFN1@ - hg38-Dec_2013 [CytoView hg19]  IFN1@ - hg38-Dec_2013 [CytoView hg38]
Mapping of homologs : NCBIIFN1@ [Mapview hg19]  IFN1@ [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)IFN1@
Gene ExpressionIFN1@ [ NCBI-GEO ]   IFN1@ [ EBI - ARRAY_EXPRESS ]   IFN1@ [ SEEK ]   IFN1@ [ MEM ]
Gene Expression Viewer (FireBrowse)IFN1@ [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)3438
GTEX Portal (Tissue expression)IFN1@
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)IFN1@
DMDM Disease mutations3438
Blocks (Seattle)IFN1@
Protein Interaction databases
BioGRIDIFN1@
STRING (EMBL)IFN1@
ZODIACIFN1@
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease3438
BioCentury BCIQIFN1@
ClinGenIFN1@
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD3438
Chemical/Pharm GKB GenePA35105
Clinical trialIFN1@
Miscellaneous
canSAR (ICR)IFN1@ (select the gene name)
Probes
Litterature
PubMed30 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineIFN1@
EVEXIFN1@
GoPubMedIFN1@
iHOPIFN1@
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 14:17:16 CET 2017

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