Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

IFN1@ (interferon, type 1, cluster)

Identity

Other aliasIFNA
HGNC (Hugo) -
LocusID (NCBI) 3438
Atlas_Id 49725
Location 9p21.3  [Link to chromosome band 9p21]
Location_base_pair Starts at 21077106 and ends at 21482313 bp from pter
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)IFN1@  3438  interferon, type 1, cluster
AliasesIFNA
GeneCards (Weizmann)IFN1@
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr9:21077106-21482313 [Contig_View]  IFN1@ [Vega]
TCGA cBioPortalIFN1@
AceView (NCBI)IFN1@
Genatlas (Paris)IFN1@
WikiGenes3438
SOURCE (Princeton)IFN1@
Genetics Home Reference (NIH)IFN1@
Genomic and cartography
GoldenPath hg38 (UCSC)IFN1@  -     chr9:21077106-21482313 9p21.3  hg38-Dec_2013   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)IFN1@  -     hg38-Dec_2013   [Description]    (hg19-Feb_2009)
EnsemblIFN1@ - hg38-Dec_2013 [CytoView hg19]  IFN1@ - hg38-Dec_2013 [CytoView hg38]
Mapping of homologs : NCBIIFN1@ [Mapview hg19]  IFN1@ [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)IFN1@
Gene ExpressionIFN1@ [ NCBI-GEO ]   IFN1@ [ EBI - ARRAY_EXPRESS ]   IFN1@ [ SEEK ]   IFN1@ [ MEM ]
Gene Expression Viewer (FireBrowse)IFN1@ [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)3438
GTEX Portal (Tissue expression)IFN1@
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)IFN1@
DMDM Disease mutations3438
Blocks (Seattle)IFN1@
Protein Interaction databases
BioGRIDIFN1@
STRING (EMBL)IFN1@
ZODIACIFN1@
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease3438
BioCentury BCIQIFN1@
ClinGenIFN1@
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD3438
Chemical/Pharm GKB GenePA35105
Clinical trialIFN1@
Miscellaneous
canSAR (ICR)IFN1@ (select the gene name)
Probes
Litterature
PubMed30 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineIFN1@
EVEXIFN1@
GoPubMedIFN1@
iHOPIFN1@
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 25 19:12:45 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.