IFNA13 (interferon, alpha 13)

Identity

Other names	-
HGNC	IFNA13
Location	9p22
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	IFNA13   5419
Entrez_Gene	IFNA13  3447  interferon, alpha 13
	Cards
GeneCards	IFNA13
Ensembl	IFNA13 [Search_View]   ENSG00000120247 [Gene_View]
Genatlas	IFNA13
GeneLynx	IFNA13
eGenome	IFNA13
euGene	3447
	Genomic and cartography
GoldenPath	IFNA13  -  9p22   chr9:21357371-21358075 -  9p21.3   [Description]    (hg18-March_2006)
Ensembl	IFNA13 - 9p21.3 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	IFNA13
	Gene and transcription
Genbank	BC069427 [ ENTREZ ]
Genbank	BC093988 [ ENTREZ ]
RefSeq	NM_006900 [ SRS ]    NM_006900 [ ENTREZ ]
RefSeq	AC_000052 [ SRS ]    AC_000052 [ ENTREZ ]
RefSeq	AC_000141 [ SRS ]    AC_000141 [ ENTREZ ]
RefSeq	NC_000009 [ SRS ]    NC_000009 [ ENTREZ ]
RefSeq	NT_008413 [ SRS ]    NT_008413 [ ENTREZ ]
RefSeq	NW_001839149 [ SRS ]    NW_001839149 [ ENTREZ ]
RefSeq	NW_924062 [ SRS ]    NW_924062 [ ENTREZ ]
AceView	IFNA13 AceView - NCBI
Unigene	Hs.533471 [ SRS ]    Hs.533471 [ NCBI ]     HS533471 [ spliceNest ]
Fast-db	3362 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	P01562 [ SRS]    P01562 [ EXPASY ]     P01562 [ INTERPRO ]     P01562 [ UNIPROT ]
Prosite	PS00252 INTERFERON_A_B_D [ SRS ]    PS00252 INTERFERON_A_B_D [ Expasy ]
Interpro	IPR012351 4_helix_cytokine_core [ SRS ]    IPR012351 4_helix_cytokine_core [ EBI ]
Interpro	IPR015589 IFNa [ SRS ]    IPR015589 IFNa [ EBI ]
Interpro	IPR000471 Interferon_abd [ SRS ]    IPR000471 Interferon_abd [ EBI ]
CluSTr	P01562
Pfam	PF00143 Interferon [ SRS ]    PF00143 Interferon [ Sanger ]    pfam00143 [ NCBI-CDD ]
Smart	SM00076 IFabd [EMBL]
Prodom	PD000550 Interferon_abd[INRA-Toulouse]
Prodom	P01562 IFNA1_HUMAN [ Domain structure ]   P01562 IFNA1_HUMAN  [ sequences sharing at least 1 domain ]
Blocks	P01562
HPRD	00964
	Protein Interaction databases
DIP	P01562
IntAct	P01562
	Polymorphism : SNP, mutations, diseases
OMIM	147578    [ map ]
GENECLINICS	147578
SNP	IFNA13 [dbSNP-NCBI]
SNP	NM_006900 [SNP-NCI]
SNP	IFNA13 [GeneSNPs - Utah]  IFNA13] [HGBASE - SRS]
HAPMAP	IFNA13 [HAPMAP]
HGMD	IFNA13
	General knowledge
Family Browser	IFNA13 [UCSC Family Browser]
SOURCE	NM_006900
SMD	Hs.533471
SAGE	Hs.533471
GO	interferon-alpha/beta receptor binding [Amigo]  interferon-alpha/beta receptor binding
GO	extracellular region [Amigo]  extracellular region
GO	extracellular space [Amigo]  extracellular space
GO	defense response [Amigo]  defense response
GO	response to virus [Amigo]  response to virus
KEGG	Cytokine-cytokine receptor interaction
KEGG	Regulation of autophagy
KEGG	Antigen processing and presentation
KEGG	Toll-like receptor signaling pathway
KEGG	Jak-STAT signaling pathway
KEGG	Natural killer cell mediated cytotoxicity
PubGene	IFNA13
TreeFam	IFNA13
CTD	3447 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	IFNA13 Related clones (RZPD - Berlin)
	PubMed
PubMed	17 Pubmed reference(s) in LocusLink

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Mon Aug 11 20:15:27 2008