IFNA17 (interferon, alpha 17)

Identity

Other names	IFNA
	INFA
	LEIF2C1
HGNC	IFNA17
Location	9p22
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	IFNA17   5422
Entrez_Gene	IFNA17  3451  interferon, alpha 17
	Cards
GeneCards	IFNA17
Ensembl	IFNA17 [Search_View]   ENSG00000214040 [Gene_View]
Genatlas	IFNA17
GeneLynx	IFNA17
eGenome	IFNA17
euGene	3451
	Genomic and cartography
GoldenPath	IFNA17  -  9p22   chr9:21217242-21218221 -  9p21.3   [Description]    (hg18-March_2006)
Ensembl	IFNA17 - 9p21.3 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	IFNA17
	Gene and transcription
Genbank	BC096732 [ ENTREZ ]
Genbank	BC098355 [ ENTREZ ]
Genbank	M11026 [ ENTREZ ]
Genbank	M38289 [ ENTREZ ]
Genbank	M71246 [ ENTREZ ]
RefSeq	NM_021268 [ SRS ]    NM_021268 [ ENTREZ ]
RefSeq	AC_000052 [ SRS ]    AC_000052 [ ENTREZ ]
RefSeq	AC_000141 [ SRS ]    AC_000141 [ ENTREZ ]
RefSeq	NC_000009 [ SRS ]    NC_000009 [ ENTREZ ]
RefSeq	NT_008413 [ SRS ]    NT_008413 [ ENTREZ ]
RefSeq	NW_001839149 [ SRS ]    NW_001839149 [ ENTREZ ]
RefSeq	NW_924062 [ SRS ]    NW_924062 [ ENTREZ ]
AceView	IFNA17 AceView - NCBI
Unigene	Hs.282276 [ SRS ]    Hs.282276 [ NCBI ]     HS282276 [ spliceNest ]
Fast-db	3350 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	P01571 [ SRS]    P01571 [ EXPASY ]     P01571 [ INTERPRO ]     P01571 [ UNIPROT ]
Prosite	PS00252 INTERFERON_A_B_D [ SRS ]    PS00252 INTERFERON_A_B_D [ Expasy ]
Interpro	IPR012351 4_helix_cytokine_core [ SRS ]    IPR012351 4_helix_cytokine_core [ EBI ]
Interpro	IPR015589 IFNa [ SRS ]    IPR015589 IFNa [ EBI ]
Interpro	IPR000471 Interferon_abd [ SRS ]    IPR000471 Interferon_abd [ EBI ]
CluSTr	P01571
Pfam	PF00143 Interferon [ SRS ]    PF00143 Interferon [ Sanger ]    pfam00143 [ NCBI-CDD ]
Smart	SM00076 IFabd [EMBL]
Prodom	PD000550 Interferon_abd[INRA-Toulouse]
Prodom	P01571 IFN17_HUMAN [ Domain structure ]   P01571 IFN17_HUMAN  [ sequences sharing at least 1 domain ]
Blocks	P01571
HPRD	00967
	Protein Interaction databases
DIP	P01571
IntAct	P01571
	Polymorphism : SNP, mutations, diseases
OMIM	147583    [ map ]
GENECLINICS	147583
SNP	IFNA17 [dbSNP-NCBI]
SNP	NM_021268 [SNP-NCI]
SNP	IFNA17 [GeneSNPs - Utah]  IFNA17] [HGBASE - SRS]
HAPMAP	IFNA17 [HAPMAP]
HGMD	IFNA17
	General knowledge
Family Browser	IFNA17 [UCSC Family Browser]
SOURCE	NM_021268
SMD	Hs.282276
SAGE	Hs.282276
GO	interferon-alpha/beta receptor binding [Amigo]  interferon-alpha/beta receptor binding
GO	extracellular region [Amigo]  extracellular region
GO	extracellular space [Amigo]  extracellular space
GO	defense response [Amigo]  defense response
GO	response to virus [Amigo]  response to virus
KEGG	Cytokine-cytokine receptor interaction
KEGG	Regulation of autophagy
KEGG	Antigen processing and presentation
KEGG	Toll-like receptor signaling pathway
KEGG	Jak-STAT signaling pathway
KEGG	Natural killer cell mediated cytotoxicity
PubGene	IFNA17
TreeFam	IFNA17
CTD	3451 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	IFNA17 Related clones (RZPD - Berlin)
	PubMed
PubMed	16 Pubmed reference(s) in LocusLink

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Mon Aug 11 20:15:28 2008