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IFT122 (intraflagellar transport 122)

Identity

Alias (NCBI)CED
CED1
FAP80
SPG
WDR10
WDR10p
WDR140
HGNC (Hugo) IFT122
HGNC Alias symbWDR140
WDR10p
SPG
FAP80
HGNC Previous nameWDR10
HGNC Previous nameWD repeat domain 10
 intraflagellar transport 122 homolog (Chlamydomonas)
LocusID (NCBI) 55764
Atlas_Id 54372
Location 3q21.3  [Link to chromosome band 3q21]
Location_base_pair Starts at 129440224 and ends at 129520507 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
DHTKD1 (10p14) / IFT122 (3q21.3)IFT122 (3q21.3) / HMCES (3q21.3)IFT122 (3q21.3) / IFT122 (3q21.3)
LOC100507412 (-) / IFT122 (3q21.3)MICALL1 (22q13.1) / IFT122 (3q21.3)IFT122 3q21.3 C3orf37

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)IFT122   13556
Cards
Entrez_Gene (NCBI)IFT122    intraflagellar transport 122
AliasesCED; CED1; FAP80; SPG; 
WDR10; WDR10p; WDR140
GeneCards (Weizmann)IFT122
Ensembl hg19 (Hinxton)ENSG00000163913 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000163913 [Gene_View]  ENSG00000163913 [Sequence]  chr3:129440224-129520507 [Contig_View]  IFT122 [Vega]
ICGC DataPortalENSG00000163913
TCGA cBioPortalIFT122
AceView (NCBI)IFT122
Genatlas (Paris)IFT122
SOURCE (Princeton)IFT122
Genetics Home Reference (NIH)IFT122
Genomic and cartography
GoldenPath hg38 (UCSC)IFT122  -     chr3:129440224-129520507 +  3q21.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)IFT122  -     3q21.3   [Description]    (hg19-Feb_2009)
GoldenPathIFT122 - 3q21.3 [CytoView hg19]  IFT122 - 3q21.3 [CytoView hg38]
ImmunoBaseENSG00000163913
Genome Data Viewer NCBIIFT122 [Mapview hg19]  
OMIM218330   606045   
Gene and transcription
Genbank (Entrez)AF244930 AF244931 AF302154 AK000773 AK001759
RefSeq transcript (Entrez)NM_001280541 NM_001280545 NM_001280546 NM_018262 NM_052985 NM_052989 NM_052990
Consensus coding sequences : CCDS (NCBI)IFT122
Gene ExpressionIFT122 [ NCBI-GEO ]   IFT122 [ EBI - ARRAY_EXPRESS ]   IFT122 [ SEEK ]   IFT122 [ MEM ]
Gene Expression Viewer (FireBrowse)IFT122 [ Firebrowse - Broad ]
GenevisibleExpression of IFT122 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)55764
GTEX Portal (Tissue expression)IFT122
Human Protein AtlasENSG00000163913-IFT122 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)IFT122
Human Protein Atlas [tissue]ENSG00000163913-IFT122 [tissue]
HPRD06922
Protein Interaction databases
BioGRIDIFT122
STRING (EMBL)IFT122
ZODIACIFT122
Ontologies - Pathways
Litterature
PubMed29 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXIFT122
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:13:29 CEST 2021

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