Atlas of Genetics and Cytogenetics in Oncology and Haematology


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IGBP1P1 (immunoglobulin (CD79A) binding protein 1 pseudogene 1)

Identity

Alias_namesC14orf19
chromosome 14 open reading frame 19
Other alias
HGNC (Hugo) IGBP1P1
LocusID (NCBI) 280655
Atlas_Id 54373
Location 14q13.2  [Link to chromosome band 14q13]
Location_base_pair Starts at 34939922 and ends at 34940496 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
SEC23A (14q21.1) / IGBP1P1 (14q13.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


Other Solid tumors implicated (Data extracted from papers in the Atlas) [ 1 ]
  Lung: Translocations in Squamous Cell Carcinoma


External links

Nomenclature
HGNC (Hugo)IGBP1P1   19709
Cards
Entrez_Gene (NCBI)IGBP1P1  280655  immunoglobulin (CD79A) binding protein 1 pseudogene 1
AliasesC14orf19
GeneCards (Weizmann)IGBP1P1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr14:34939922-34940496 [Contig_View]  IGBP1P1 [Vega]
TCGA cBioPortalIGBP1P1
AceView (NCBI)IGBP1P1
Genatlas (Paris)IGBP1P1
WikiGenes280655
SOURCE (Princeton)IGBP1P1
Genetics Home Reference (NIH)IGBP1P1
Genomic and cartography
GoldenPath hg38 (UCSC)IGBP1P1  -     chr14:34939922-34940496 +  14q13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)IGBP1P1  -     14q13.2   [Description]    (hg19-Feb_2009)
EnsemblIGBP1P1 - 14q13.2 [CytoView hg19]  IGBP1P1 - 14q13.2 [CytoView hg38]
Mapping of homologs : NCBIIGBP1P1 [Mapview hg19]  IGBP1P1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AY168620
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)IGBP1P1
Cluster EST : UnigeneHs.639271 [ NCBI ]
CGAP (NCI)Hs.639271
Gene ExpressionIGBP1P1 [ NCBI-GEO ]   IGBP1P1 [ EBI - ARRAY_EXPRESS ]   IGBP1P1 [ SEEK ]   IGBP1P1 [ MEM ]
Gene Expression Viewer (FireBrowse)IGBP1P1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)280655
GTEX Portal (Tissue expression)IGBP1P1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)IGBP1P1
DMDM Disease mutations280655
Blocks (Seattle)IGBP1P1
Protein Interaction databases
BioGRIDIGBP1P1
STRING (EMBL)IGBP1P1
ZODIACIGBP1P1
Ontologies - Pathways
Huge Navigator IGBP1P1 [HugePedia]
snp3D : Map Gene to Disease280655
BioCentury BCIQIGBP1P1
ClinGenIGBP1P1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD280655
Chemical/Pharm GKB GenePA134889032
Clinical trialIGBP1P1
Miscellaneous
canSAR (ICR)IGBP1P1 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineIGBP1P1
EVEXIGBP1P1
GoPubMedIGBP1P1
iHOPIGBP1P1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Aug 1 17:03:46 CEST 2017

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