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IGF2-AS (IGF2 antisense RNA)

Identity

Alias_namesIGF2AS
insulin-like growth factor 2, antisense
IGF2 antisense RNA (non-protein coding)
Alias_symbol (synonym)PEG8
IGF2-AS1
Other alias
HGNC (Hugo) IGF2-AS
LocusID (NCBI) 51214
Atlas_Id 52579
Location 11p15.5  [Link to chromosome band 11p15]
Location_base_pair Starts at 2161747 and ends at 2169894 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)IGF2-AS   14062
Cards
Entrez_Gene (NCBI)IGF2-AS  51214  IGF2 antisense RNA
AliasesIGF2-AS1; IGF2AS; PEG8
GeneCards (Weizmann)IGF2-AS
Ensembl hg19 (Hinxton)ENSG00000099869 [Gene_View]  chr11:2161747-2169894 [Contig_View]  IGF2-AS [Vega]
Ensembl hg38 (Hinxton)ENSG00000099869 [Gene_View]  chr11:2161747-2169894 [Contig_View]  IGF2-AS [Vega]
ICGC DataPortalENSG00000099869
TCGA cBioPortalIGF2-AS
AceView (NCBI)IGF2-AS
Genatlas (Paris)IGF2-AS
WikiGenes51214
SOURCE (Princeton)IGF2-AS
Genetics Home Reference (NIH)IGF2-AS
Genomic and cartography
GoldenPath hg19 (UCSC)IGF2-AS  -     chr11:2161747-2169894 +  11p15.5   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)IGF2-AS  -     11p15.5   [Description]    (hg38-Dec_2013)
EnsemblIGF2-AS - 11p15.5 [CytoView hg19]  IGF2-AS - 11p15.5 [CytoView hg38]
Mapping of homologs : NCBIIGF2-AS [Mapview hg19]  IGF2-AS [Mapview hg38]
OMIM610146   
Gene and transcription
Genbank (Entrez)AB030733 AL521915 AL530868 AL545164 AY149295
RefSeq transcript (Entrez)NM_016412
RefSeq genomic (Entrez)NC_000011 NC_018922 NG_008849 NT_009237 NW_004929378
Consensus coding sequences : CCDS (NCBI)IGF2-AS
Cluster EST : UnigeneHs.716962 [ NCBI ]
CGAP (NCI)Hs.716962
Alternative Splicing GalleryENSG00000099869
Gene ExpressionIGF2-AS [ NCBI-GEO ]   IGF2-AS [ EBI - ARRAY_EXPRESS ]   IGF2-AS [ SEEK ]   IGF2-AS [ MEM ]
Gene Expression Viewer (FireBrowse)IGF2-AS [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)51214
GTEX Portal (Tissue expression)IGF2-AS
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6U949   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6U949  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6U949
Splice isoforms : SwissVarQ6U949
PhosPhoSitePlusQ6U949
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)IGF2-AS
DMDM Disease mutations51214
Blocks (Seattle)IGF2-AS
SuperfamilyQ6U949
Human Protein AtlasENSG00000099869
Peptide AtlasQ6U949
HPRD10000
IPIIPI00009019   IPI00385443   IPI00657872   
Protein Interaction databases
DIP (DOE-UCLA)Q6U949
IntAct (EBI)Q6U949
FunCoupENSG00000099869
BioGRIDIGF2-AS
STRING (EMBL)IGF2-AS
ZODIACIGF2-AS
Ontologies - Pathways
QuickGOQ6U949
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkIGF2-AS
Atlas of Cancer Signalling NetworkIGF2-AS
Wikipedia pathwaysIGF2-AS
Orthology - Evolution
OrthoDB51214
GeneTree (enSembl)ENSG00000099869
Phylogenetic Trees/Animal Genes : TreeFamIGF2-AS
HOVERGENQ6U949
HOGENOMQ6U949
Homologs : HomoloGeneIGF2-AS
Homology/Alignments : Family Browser (UCSC)IGF2-AS
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerIGF2-AS [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)IGF2-AS
dbVarIGF2-AS
ClinVarIGF2-AS
1000_GenomesIGF2-AS 
Exome Variant ServerIGF2-AS
ExAC (Exome Aggregation Consortium)IGF2-AS (select the gene name)
Genetic variants : HAPMAP51214
Genomic Variants (DGV)IGF2-AS [DGVbeta]
DECIPHER (Syndromes)11:2161747-2169894  ENSG00000099869
CONAN: Copy Number AnalysisIGF2-AS 
Mutations
ICGC Data PortalIGF2-AS 
TCGA Data PortalIGF2-AS 
Broad Tumor PortalIGF2-AS
OASIS PortalIGF2-AS [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDIGF2-AS
BioMutasearch IGF2-AS
DgiDB (Drug Gene Interaction Database)IGF2-AS
DoCM (Curated mutations)IGF2-AS (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)IGF2-AS (select a term)
intoGenIGF2-AS
Cancer3DIGF2-AS(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM610146   
Orphanet
MedgenIGF2-AS
Genetic Testing Registry IGF2-AS
NextProtQ6U949 [Medical]
TSGene51214
GENETestsIGF2-AS
Huge Navigator IGF2-AS [HugePedia]
snp3D : Map Gene to Disease51214
BioCentury BCIQIGF2-AS
ClinGenIGF2-AS
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD51214
Chemical/Pharm GKB GenePA29700
Clinical trialIGF2-AS
Miscellaneous
canSAR (ICR)IGF2-AS (select the gene name)
Probes
Litterature
PubMed21 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineIGF2-AS
EVEXIGF2-AS
GoPubMedIGF2-AS
iHOPIGF2-AS
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Mar 30 15:04:51 CEST 2017

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