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IGFL1 (IGF like family member 1)

Identity

Alias_symbol (synonym)UNQ644
Other aliasAPRG644
HGNC (Hugo) IGFL1
LocusID (NCBI) 374918
Atlas_Id 52318
Location 19q13.32  [Link to chromosome band 19q13]
Location_base_pair Starts at 46733009 and ends at 46734500 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)IGFL1   24093
Cards
Entrez_Gene (NCBI)IGFL1  374918  IGF like family member 1
AliasesAPRG644; UNQ644
GeneCards (Weizmann)IGFL1
Ensembl hg19 (Hinxton)ENSG00000188293 [Gene_View]  chr19:46733009-46734500 [Contig_View]  IGFL1 [Vega]
Ensembl hg38 (Hinxton)ENSG00000188293 [Gene_View]  chr19:46733009-46734500 [Contig_View]  IGFL1 [Vega]
ICGC DataPortalENSG00000188293
TCGA cBioPortalIGFL1
AceView (NCBI)IGFL1
Genatlas (Paris)IGFL1
WikiGenes374918
SOURCE (Princeton)IGFL1
Genetics Home Reference (NIH)IGFL1
Genomic and cartography
GoldenPath hg19 (UCSC)IGFL1  -     chr19:46733009-46734500 +  19q13.32   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)IGFL1  -     19q13.32   [Description]    (hg38-Dec_2013)
EnsemblIGFL1 - 19q13.32 [CytoView hg19]  IGFL1 - 19q13.32 [CytoView hg38]
Mapping of homologs : NCBIIGFL1 [Mapview hg19]  IGFL1 [Mapview hg38]
OMIM610544   
Gene and transcription
Genbank (Entrez)AY359013 AY672111 BC152955
RefSeq transcript (Entrez)NM_198541
RefSeq genomic (Entrez)NC_000019 NC_018930 NT_011109 NW_004929415
Consensus coding sequences : CCDS (NCBI)IGFL1
Cluster EST : UnigeneHs.546554 [ NCBI ]
CGAP (NCI)Hs.546554
Alternative Splicing GalleryENSG00000188293
Gene ExpressionIGFL1 [ NCBI-GEO ]   IGFL1 [ EBI - ARRAY_EXPRESS ]   IGFL1 [ SEEK ]   IGFL1 [ MEM ]
Gene Expression Viewer (FireBrowse)IGFL1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)374918
GTEX Portal (Tissue expression)IGFL1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6UW32   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6UW32  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6UW32
Splice isoforms : SwissVarQ6UW32
PhosPhoSitePlusQ6UW32
Domains : Interpro (EBI)IGFL   
Domain families : Pfam (Sanger)IGFL (PF14653)   
Domain families : Pfam (NCBI)pfam14653   
Conserved Domain (NCBI)IGFL1
DMDM Disease mutations374918
Blocks (Seattle)IGFL1
SuperfamilyQ6UW32
Human Protein AtlasENSG00000188293
Peptide AtlasQ6UW32
HPRD17139
IPIIPI00374666   
Protein Interaction databases
DIP (DOE-UCLA)Q6UW32
IntAct (EBI)Q6UW32
FunCoupENSG00000188293
BioGRIDIGFL1
STRING (EMBL)IGFL1
ZODIACIGFL1
Ontologies - Pathways
QuickGOQ6UW32
Ontology : AmiGOprotein binding  extracellular space  
Ontology : EGO-EBIprotein binding  extracellular space  
NDEx NetworkIGFL1
Atlas of Cancer Signalling NetworkIGFL1
Wikipedia pathwaysIGFL1
Orthology - Evolution
OrthoDB374918
GeneTree (enSembl)ENSG00000188293
Phylogenetic Trees/Animal Genes : TreeFamIGFL1
HOVERGENQ6UW32
HOGENOMQ6UW32
Homologs : HomoloGeneIGFL1
Homology/Alignments : Family Browser (UCSC)IGFL1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerIGFL1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)IGFL1
dbVarIGFL1
ClinVarIGFL1
1000_GenomesIGFL1 
Exome Variant ServerIGFL1
ExAC (Exome Aggregation Consortium)IGFL1 (select the gene name)
Genetic variants : HAPMAP374918
Genomic Variants (DGV)IGFL1 [DGVbeta]
DECIPHER (Syndromes)19:46733009-46734500  ENSG00000188293
CONAN: Copy Number AnalysisIGFL1 
Mutations
ICGC Data PortalIGFL1 
TCGA Data PortalIGFL1 
Broad Tumor PortalIGFL1
OASIS PortalIGFL1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICIGFL1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDIGFL1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch IGFL1
DgiDB (Drug Gene Interaction Database)IGFL1
DoCM (Curated mutations)IGFL1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)IGFL1 (select a term)
intoGenIGFL1
Cancer3DIGFL1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM610544   
Orphanet
MedgenIGFL1
Genetic Testing Registry IGFL1
NextProtQ6UW32 [Medical]
TSGene374918
GENETestsIGFL1
Huge Navigator IGFL1 [HugePedia]
snp3D : Map Gene to Disease374918
BioCentury BCIQIGFL1
ClinGenIGFL1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD374918
Chemical/Pharm GKB GenePA147357921
Clinical trialIGFL1
Miscellaneous
canSAR (ICR)IGFL1 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineIGFL1
EVEXIGFL1
GoPubMedIGFL1
iHOPIGFL1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Thu Mar 30 15:04:53 CEST 2017

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