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IGFL2 (IGF like family member 2)

Identity

Alias_symbol (synonym)UNQ645
Other aliasVPRI645
HGNC (Hugo) IGFL2
LocusID (NCBI) 147920
Atlas_Id 64545
Location 19q13.32  [Link to chromosome band 19q13]
Location_base_pair Starts at 46147782 and ends at 46161304 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)IGFL2   32929
Cards
Entrez_Gene (NCBI)IGFL2  147920  IGF like family member 2
AliasesUNQ645; VPRI645
GeneCards (Weizmann)IGFL2
Ensembl hg19 (Hinxton)ENSG00000204866 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000204866 [Gene_View]  chr19:46147782-46161304 [Contig_View]  IGFL2 [Vega]
ICGC DataPortalENSG00000204866
TCGA cBioPortalIGFL2
AceView (NCBI)IGFL2
Genatlas (Paris)IGFL2
WikiGenes147920
SOURCE (Princeton)IGFL2
Genetics Home Reference (NIH)IGFL2
Genomic and cartography
GoldenPath hg38 (UCSC)IGFL2  -     chr19:46147782-46161304 +  19q13.32   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)IGFL2  -     19q13.32   [Description]    (hg19-Feb_2009)
EnsemblIGFL2 - 19q13.32 [CytoView hg19]  IGFL2 - 19q13.32 [CytoView hg38]
Mapping of homologs : NCBIIGFL2 [Mapview hg19]  IGFL2 [Mapview hg38]
OMIM610545   
Gene and transcription
Genbank (Entrez)AK093330 AK125754 AW009166 AY358692 AY672112
RefSeq transcript (Entrez)NM_001002915 NM_001135113
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)IGFL2
Cluster EST : UnigeneHs.99376 [ NCBI ]
CGAP (NCI)Hs.99376
Alternative Splicing GalleryENSG00000204866
Gene ExpressionIGFL2 [ NCBI-GEO ]   IGFL2 [ EBI - ARRAY_EXPRESS ]   IGFL2 [ SEEK ]   IGFL2 [ MEM ]
Gene Expression Viewer (FireBrowse)IGFL2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)147920
GTEX Portal (Tissue expression)IGFL2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6UWQ7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6UWQ7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6UWQ7
Splice isoforms : SwissVarQ6UWQ7
PhosPhoSitePlusQ6UWQ7
Domains : Interpro (EBI)IGFL   
Domain families : Pfam (Sanger)IGFL (PF14653)   
Domain families : Pfam (NCBI)pfam14653   
Conserved Domain (NCBI)IGFL2
DMDM Disease mutations147920
Blocks (Seattle)IGFL2
SuperfamilyQ6UWQ7
Human Protein AtlasENSG00000204866
Peptide AtlasQ6UWQ7
HPRD13729
IPIIPI00658030   IPI00465158   
Protein Interaction databases
DIP (DOE-UCLA)Q6UWQ7
IntAct (EBI)Q6UWQ7
FunCoupENSG00000204866
BioGRIDIGFL2
STRING (EMBL)IGFL2
ZODIACIGFL2
Ontologies - Pathways
QuickGOQ6UWQ7
Ontology : AmiGOextracellular region  
Ontology : EGO-EBIextracellular region  
NDEx NetworkIGFL2
Atlas of Cancer Signalling NetworkIGFL2
Wikipedia pathwaysIGFL2
Orthology - Evolution
OrthoDB147920
GeneTree (enSembl)ENSG00000204866
Phylogenetic Trees/Animal Genes : TreeFamIGFL2
HOVERGENQ6UWQ7
HOGENOMQ6UWQ7
Homologs : HomoloGeneIGFL2
Homology/Alignments : Family Browser (UCSC)IGFL2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerIGFL2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)IGFL2
dbVarIGFL2
ClinVarIGFL2
1000_GenomesIGFL2 
Exome Variant ServerIGFL2
ExAC (Exome Aggregation Consortium)IGFL2 (select the gene name)
Genetic variants : HAPMAP147920
Genomic Variants (DGV)IGFL2 [DGVbeta]
DECIPHERIGFL2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisIGFL2 
Mutations
ICGC Data PortalIGFL2 
TCGA Data PortalIGFL2 
Broad Tumor PortalIGFL2
OASIS PortalIGFL2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICIGFL2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDIGFL2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch IGFL2
DgiDB (Drug Gene Interaction Database)IGFL2
DoCM (Curated mutations)IGFL2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)IGFL2 (select a term)
intoGenIGFL2
Cancer3DIGFL2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM610545   
Orphanet
MedgenIGFL2
Genetic Testing Registry IGFL2
NextProtQ6UWQ7 [Medical]
TSGene147920
GENETestsIGFL2
Huge Navigator IGFL2 [HugePedia]
snp3D : Map Gene to Disease147920
BioCentury BCIQIGFL2
ClinGenIGFL2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD147920
Chemical/Pharm GKB GenePA147357935
Clinical trialIGFL2
Miscellaneous
canSAR (ICR)IGFL2 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineIGFL2
EVEXIGFL2
GoPubMedIGFL2
iHOPIGFL2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Fri May 19 11:16:35 CEST 2017

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