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IGFL3 (IGF like family member 3)

Identity

Alias_symbol (synonym)UNQ483
Other alias
HGNC (Hugo) IGFL3
LocusID (NCBI) 388555
Atlas_Id 64546
Location 19q13.32  [Link to chromosome band 19q13]
Location_base_pair Starts at 46120071 and ends at 46124674 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)IGFL3   32930
Cards
Entrez_Gene (NCBI)IGFL3  388555  IGF like family member 3
AliasesUNQ483
GeneCards (Weizmann)IGFL3
Ensembl hg19 (Hinxton)ENSG00000188624 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000188624 [Gene_View]  chr19:46120071-46124674 [Contig_View]  IGFL3 [Vega]
ICGC DataPortalENSG00000188624
TCGA cBioPortalIGFL3
AceView (NCBI)IGFL3
Genatlas (Paris)IGFL3
WikiGenes388555
SOURCE (Princeton)IGFL3
Genetics Home Reference (NIH)IGFL3
Genomic and cartography
GoldenPath hg38 (UCSC)IGFL3  -     chr19:46120071-46124674 -  19q13.32   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)IGFL3  -     19q13.32   [Description]    (hg19-Feb_2009)
EnsemblIGFL3 - 19q13.32 [CytoView hg19]  IGFL3 - 19q13.32 [CytoView hg38]
Mapping of homologs : NCBIIGFL3 [Mapview hg19]  IGFL3 [Mapview hg38]
OMIM610546   
Gene and transcription
Genbank (Entrez)AY358434 AY672113 BC130593 BC130597 HQ258051
RefSeq transcript (Entrez)NM_207393
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)IGFL3
Cluster EST : UnigeneHs.365496 [ NCBI ]
CGAP (NCI)Hs.365496
Alternative Splicing GalleryENSG00000188624
Gene ExpressionIGFL3 [ NCBI-GEO ]   IGFL3 [ EBI - ARRAY_EXPRESS ]   IGFL3 [ SEEK ]   IGFL3 [ MEM ]
Gene Expression Viewer (FireBrowse)IGFL3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)388555
GTEX Portal (Tissue expression)IGFL3
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6UXB1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6UXB1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6UXB1
Splice isoforms : SwissVarQ6UXB1
PhosPhoSitePlus4A HRAFhttp://www.phosphosite.org/uniprotAccAction.do?id=Q6UXB1 TARGET=PhosphoSitePlus>Q6UXB1
Domains : Interpro (EBI)IGFL   
Domain families : Pfam (Sanger)IGFL (PF14653)   
Domain families : Pfam (NCBI)pfam14653   
Conserved Domain (NCBI)IGFL3
DMDM Disease mutations388555
Blocks (Seattle)IGFL3
SuperfamilyQ6UXB1
Human Protein AtlasENSG00000188624
Peptide AtlasQ6UXB1
HPRD17140
IPIIPI00397724   
Protein Interaction databases
DIP (DOE-UCLA)Q6UXB1
IntAct (EBI)Q6UXB1
FunCoupENSG00000188624
BioGRIDIGFL3
STRING (EMBL)IGFL3
ZODIACIGFL3
Ontologies - Pathways
QuickGOQ6UXB1
Ontology : AmiGOextracellular region  
Ontology : EGO-EBIextracellular region  
NDEx NetworkIGFL3
Atlas of Cancer Signalling NetworkIGFL3
Wikipedia pathwaysIGFL3
Orthology - Evolution
OrthoDB388555
GeneTree (enSembl)ENSG00000188624
Phylogenetic Trees/Animal Genes : TreeFamIGFL3
HOVERGENQ6UXB1
HOGENOMQ6UXB1
Homologs : HomoloGeneIGFL3
Homology/Alignments : Family Browser (UCSC)IGFL3
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerIGFL3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)IGFL3
dbVarIGFL3
ClinVarIGFL3
1000_GenomesIGFL3 
Exome Variant ServerIGFL3
ExAC (Exome Aggregation Consortium)IGFL3 (select the gene name)
Genetic variants : HAPMAP388555
Genomic Variants (DGV)IGFL3 [DGVbeta]
DECIPHERIGFL3 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisIGFL3 
Mutations
ICGC Data PortalIGFL3 
TCGA Data PortalIGFL3 
Broad Tumor PortalIGFL3
OASIS PortalIGFL3 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICIGFL3  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDIGFL3
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch IGFL3
DgiDB (Drug Gene Interaction Database)IGFL3
DoCM (Curated mutations)IGFL3 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)IGFL3 (select a term)
intoGenIGFL3
Cancer3DIGFL3(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM610546   
Orphanet
MedgenIGFL3
Genetic Testing Registry IGFL3
NextProtQ6UXB1 [Medical]
TSGene388555
GENETestsIGFL3
Target ValidationIGFL3
Huge Navigator IGFL3 [HugePedia]
snp3D : Map Gene to Disease388555
BioCentury BCIQIGFL3
ClinGenIGFL3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD388555
Chemical/Pharm GKB GenePA147357949
Clinical trialIGFL3
Miscellaneous
canSAR (ICR)IGFL3 (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineIGFL3
EVEXIGFL3
GoPubMedIGFL3
iHOPIGFL3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:11:02 CEST 2017

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