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IGHG1 (immunoglobulin heavy constant gamma 1 (G1m marker))

Identity

Other alias-
HGNC (Hugo) IGHG1
LocusID (NCBI) 3500
Atlas_Id 52481
Location 14q32.33  [Link to chromosome band 14q32]
Location_base_pair Starts at 106207814 and ends at 106209400 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
ACTB (7p22.1) / IGHG1 (14q32.33)CCND1 (11q13.3) / IGHG1 (14q32.33)CD74 (5q32) / IGHG1 (14q32.33)
FGFR3 (4p16.3) / IGHG1 (14q32.33)HLA-A (6p22.1) / IGHG1 (14q32.33)IGHG1 (14q32.33) / BCL10 (1p22.3)
IGHG1 (14q32.33) / BCL11A (2p16.1)IGHG1 (14q32.33) / BCL2 (18q21.33)IGHG1 (14q32.33) / BCL3 (19q13.32)
IGHG1 (14q32.33) / BCL6 (3q27.3)IGHG1 (14q32.33) / BCL6BCL9 ()IGHG1 (14q32.33) / CCND1 (11q13.3)
IGHG1 (14q32.33) / CCND2 (12p13.32)IGHG1 (14q32.33) / CCND3 (6p21.1)IGHG1 (14q32.33) / CDK6 (7q21.2)
IGHG1 (14q32.33) / CEBPA (19q13.11)IGHG1 (14q32.33) / CEBPB (20q13.13)IGHG1 (14q32.33) / CEBPD (8q11.21)
IGHG1 (14q32.33) / CEBPE (14q11.2)IGHG1 (14q32.33) / CEBPG (19q13.11)IGHG1 (14q32.33) / CHST11 (12q23.3)
IGHG1 (14q32.33) / CNN3 (1p21.3)IGHG1 (14q32.33) / DDX6 (11q23.3)IGHG1 (14q32.33) / ERVW-1 ()
IGHG1 (14q32.33) / ETV6 (12p13.2)IGHG1 (14q32.33) / FCGR2B (1q23.3)IGHG1 (14q32.33) / FCRL4 (1q23.1)
IGHG1 (14q32.33) / FGFR3 (4p16.3)IGHG1 (14q32.33) / FOXP1 (3p13)IGHG1 (14q32.33) / ID4 (6p22.3)
IGHG1 (14q32.33) / IGLL5 (22q11.22)IGHG1 (14q32.33) / IL3 (5q31.1)IGHG1 (14q32.33) / IRF4 (6p25.3)
IGHG1 (14q32.33) / KDM4C (9p24.1)IGHG1 (14q32.33) / LHX4 (1q25.2)IGHG1 (14q32.33) / MAF (16q23.2)
IGHG1 (14q32.33) / MAFB (20q12)IGHG1 (14q32.33) / MALT1 (18q21.32)IGHG1 (14q32.33) / MUC1 (1q22)
IGHG1 (14q32.33) / MYC (8q24.21)IGHG1 (14q32.33) / MYCN (2p24.3)IGHG1 (14q32.33) / NFKB2 (10q24.32)
IGHG1 (14q32.33) / PAFAH1B2 (11q23.3)IGHG1 (14q32.33) / PAX5 (9p13.2)IGHG1 (14q32.33) / PCSK7 (11q23.3)
IGHG1 (14q32.33) / RHOH (4p14)IGHG1 (14q32.33) / SPIB (19q13.33)IGHG1 (14q32.33) / TENM2 (5q34)
IGHG1 (14q32.33) / WHSC1 (4p16.3)IGHV3OR16-6 () / IGHG1 (14q32.33)IGKC (2p11.2) / IGHG1 (14q32.33)
IGKV3-11 () / IGHG1 (14q32.33)IGKV3-20 (2p11.2) / IGHG1 (14q32.33)IGLC2 () / IGHG1 (14q32.33)
IGLC3 () / IGHG1 (14q32.33)LHX4 (1q25.2) / IGHG1 (14q32.33)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)IGHG1   5525
Cards
Entrez_Gene (NCBI)IGHG1  3500  immunoglobulin heavy constant gamma 1 (G1m marker)
Aliases
GeneCards (Weizmann)IGHG1
Ensembl hg19 (Hinxton) [Gene_View]  chr14:106207814-106209400 [Contig_View]  IGHG1 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr14:106207814-106209400 [Contig_View]  IGHG1 [Vega]
TCGA cBioPortalIGHG1
AceView (NCBI)IGHG1
Genatlas (Paris)IGHG1
WikiGenes3500
SOURCE (Princeton)IGHG1
Genetics Home Reference (NIH)IGHG1
Genomic and cartography
GoldenPath hg19 (UCSC)IGHG1  -     chr14:106207814-106209400 -  14q32.33   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)IGHG1  -     14q32.33   [Description]    (hg38-Dec_2013)
EnsemblIGHG1 - 14q32.33 [CytoView hg19]  IGHG1 - 14q32.33 [CytoView hg38]
Mapping of homologs : NCBIIGHG1 [Mapview hg19]  IGHG1 [Mapview hg38]
OMIM147100   
Gene and transcription
Genbank (Entrez)AJ294730 AK057754 AK057775 AK093636 AK097010
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000014 NG_001019 NT_026437 NT_187600
Consensus coding sequences : CCDS (NCBI)IGHG1
Cluster EST : UnigeneHs.510635 [ NCBI ]
CGAP (NCI)Hs.510635
Gene ExpressionIGHG1 [ NCBI-GEO ]   IGHG1 [ EBI - ARRAY_EXPRESS ]   IGHG1 [ SEEK ]   IGHG1 [ MEM ]
Gene Expression Viewer (FireBrowse)IGHG1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)3500
GTEX Portal (Tissue expression)IGHG1
Protein : pattern, domain, 3D structure
UniProt/SwissProtP01857   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP01857  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP01857
Splice isoforms : SwissVarP01857
PhosPhoSitePlusP01857
Domaine pattern : Prosite (Expaxy)IG_LIKE (PS50835)    IG_MHC (PS00290)   
Domains : Interpro (EBI)Ig-like_dom    Ig-like_fold    Ig/MHC_CS    Ig_C1-set   
Domain families : Pfam (Sanger)C1-set (PF07654)   
Domain families : Pfam (NCBI)pfam07654   
Domain families : Smart (EMBL)IGc1 (SM00407)  
Conserved Domain (NCBI)IGHG1
DMDM Disease mutations3500
Blocks (Seattle)IGHG1
PDB (SRS)1AJ7    1AQK    1BEY    1D5B    1D5I    1D6V    1DFB    1DN2    1E4K    1FC1    1FC2    1FCC    1GAF    1H3T    1H3U    1H3V    1H3W    1H3X    1H3Y    1HKL    1HZH    1I7Z    1L6X    1N7M    1OP3    1OQO    1OQX    1T83    1T89    1VGE    2DTS    2GJ7    2I5Y    2IWG    2J6E    2JB5    2JB6    2O5X    2O5Y    2O5Z    2OSL    2QAD    2QL1    2QQK    2QQL    2QQN    2QR0    2R56    2RCJ    2RCS    2VXQ    2WAH    3AGV    3AVE    3AY4    3B2U    3B2V    3BDY    3BE1    3BKY    3BN9    3BQU    3C08    3C09    3C2S    3CFJ    3CFK    3CSY    3D0L    3D0V    3D6G    3D85    3DJ9    3DNK    3DO3    3DRO    3DRQ    3DVG    3DVN    3EYF    3EYO    3EYQ    3FJT    3O11    3RY6    3S7G    3SGJ    3SGK    3TV3    3TWC    3TYG    3U0W    3U7W    3U7Y    3V7M    3V8C    3V95    3WJJ    3WJL    3WKN    3WN5    4ACP    4B7I    4BM7    4BSV    4BSW    4BYH    4CDH    4D9Q    4D9R    4DAG    4DZ8    4EOW    4J12    4KU1    4LLD    4LLM    4LLQ    4N0U    4NQS    4NQT    4NQU    4NWT    4NWU    4O4Y    4O51    4Q6Y    4Q74    4Q7D    4W4N    4W4O    4WI2    4WI3    4WI4    4WI5    4WI6    4WI7    4WI8    4WI9    4X4M    4X98    4X99    4ZNE    5BW7    5HSF   
PDB (PDBSum)1AJ7    1AQK    1BEY    1D5B    1D5I    1D6V    1DFB    1DN2    1E4K    1FC1    1FC2    1FCC    1GAF    1H3T    1H3U    1H3V    1H3W    1H3X    1H3Y    1HKL    1HZH    1I7Z    1L6X    1N7M    1OP3    1OQO    1OQX    1T83    1T89    1VGE    2DTS    2GJ7    2I5Y    2IWG    2J6E    2JB5    2JB6    2O5X    2O5Y    2O5Z    2OSL    2QAD    2QL1    2QQK    2QQL    2QQN    2QR0    2R56    2RCJ    2RCS    2VXQ    2WAH    3AGV    3AVE    3AY4    3B2U    3B2V    3BDY    3BE1    3BKY    3BN9    3BQU    3C08    3C09    3C2S    3CFJ    3CFK    3CSY    3D0L    3D0V    3D6G    3D85    3DJ9    3DNK    3DO3    3DRO    3DRQ    3DVG    3DVN    3EYF    3EYO    3EYQ    3FJT    3O11    3RY6    3S7G    3SGJ    3SGK    3TV3    3TWC    3TYG    3U0W    3U7W    3U7Y    3V7M    3V8C    3V95    3WJJ    3WJL    3WKN    3WN5    4ACP    4B7I    4BM7    4BSV    4BSW    4BYH    4CDH    4D9Q    4D9R    4DAG    4DZ8    4EOW    4J12    4KU1    4LLD    4LLM    4LLQ    4N0U    4NQS    4NQT    4NQU    4NWT    4NWU    4O4Y    4O51    4Q6Y    4Q74    4Q7D    4W4N    4W4O    4WI2    4WI3    4WI4    4WI5    4WI6    4WI7    4WI8    4WI9    4X4M    4X98    4X99    4ZNE    5BW7    5HSF   
PDB (IMB)1AJ7    1AQK    1BEY    1D5B    1D5I    1D6V    1DFB    1DN2    1E4K    1FC1    1FC2    1FCC    1GAF    1H3T    1H3U    1H3V    1H3W    1H3X    1H3Y    1HKL    1HZH    1I7Z    1L6X    1N7M    1OP3    1OQO    1OQX    1T83    1T89    1VGE    2DTS    2GJ7    2I5Y    2IWG    2J6E    2JB5    2JB6    2O5X    2O5Y    2O5Z    2OSL    2QAD    2QL1    2QQK    2QQL    2QQN    2QR0    2R56    2RCJ    2RCS    2VXQ    2WAH    3AGV    3AVE    3AY4    3B2U    3B2V    3BDY    3BE1    3BKY    3BN9    3BQU    3C08    3C09    3C2S    3CFJ    3CFK    3CSY    3D0L    3D0V    3D6G    3D85    3DJ9    3DNK    3DO3    3DRO    3DRQ    3DVG    3DVN    3EYF    3EYO    3EYQ    3FJT    3O11    3RY6    3S7G    3SGJ    3SGK    3TV3    3TWC    3TYG    3U0W    3U7W    3U7Y    3V7M    3V8C    3V95    3WJJ    3WJL    3WKN    3WN5    4ACP    4B7I    4BM7    4BSV    4BSW    4BYH    4CDH    4D9Q    4D9R    4DAG    4DZ8    4EOW    4J12    4KU1    4LLD    4LLM    4LLQ    4N0U    4NQS    4NQT    4NQU    4NWT    4NWU    4O4Y    4O51    4Q6Y    4Q74    4Q7D    4W4N    4W4O    4WI2    4WI3    4WI4    4WI5    4WI6    4WI7    4WI8    4WI9    4X4M    4X98    4X99    4ZNE    5BW7    5HSF   
PDB (RSDB)1AJ7    1AQK    1BEY    1D5B    1D5I    1D6V    1DFB    1DN2    1E4K    1FC1    1FC2    1FCC    1GAF    1H3T    1H3U    1H3V    1H3W    1H3X    1H3Y    1HKL    1HZH    1I7Z    1L6X    1N7M    1OP3    1OQO    1OQX    1T83    1T89    1VGE    2DTS    2GJ7    2I5Y    2IWG    2J6E    2JB5    2JB6    2O5X    2O5Y    2O5Z    2OSL    2QAD    2QL1    2QQK    2QQL    2QQN    2QR0    2R56    2RCJ    2RCS    2VXQ    2WAH    3AGV    3AVE    3AY4    3B2U    3B2V    3BDY    3BE1    3BKY    3BN9    3BQU    3C08    3C09    3C2S    3CFJ    3CFK    3CSY    3D0L    3D0V    3D6G    3D85    3DJ9    3DNK    3DO3    3DRO    3DRQ    3DVG    3DVN    3EYF    3EYO    3EYQ    3FJT    3O11    3RY6    3S7G    3SGJ    3SGK    3TV3    3TWC    3TYG    3U0W    3U7W    3U7Y    3V7M    3V8C    3V95    3WJJ    3WJL    3WKN    3WN5    4ACP    4B7I    4BM7    4BSV    4BSW    4BYH    4CDH    4D9Q    4D9R    4DAG    4DZ8    4EOW    4J12    4KU1    4LLD    4LLM    4LLQ    4N0U    4NQS    4NQT    4NQU    4NWT    4NWU    4O4Y    4O51    4Q6Y    4Q74    4Q7D    4W4N    4W4O    4WI2    4WI3    4WI4    4WI5    4WI6    4WI7    4WI8    4WI9    4X4M    4X98    4X99    4ZNE    5BW7    5HSF   
Structural Biology KnowledgeBase1AJ7    1AQK    1BEY    1D5B    1D5I    1D6V    1DFB    1DN2    1E4K    1FC1    1FC2    1FCC    1GAF    1H3T    1H3U    1H3V    1H3W    1H3X    1H3Y    1HKL    1HZH    1I7Z    1L6X    1N7M    1OP3    1OQO    1OQX    1T83    1T89    1VGE    2DTS    2GJ7    2I5Y    2IWG    2J6E    2JB5    2JB6    2O5X    2O5Y    2O5Z    2OSL    2QAD    2QL1    2QQK    2QQL    2QQN    2QR0    2R56    2RCJ    2RCS    2VXQ    2WAH    3AGV    3AVE    3AY4    3B2U    3B2V    3BDY    3BE1    3BKY    3BN9    3BQU    3C08    3C09    3C2S    3CFJ    3CFK    3CSY    3D0L    3D0V    3D6G    3D85    3DJ9    3DNK    3DO3    3DRO    3DRQ    3DVG    3DVN    3EYF    3EYO    3EYQ    3FJT    3O11    3RY6    3S7G    3SGJ    3SGK    3TV3    3TWC    3TYG    3U0W    3U7W    3U7Y    3V7M    3V8C    3V95    3WJJ    3WJL    3WKN    3WN5    4ACP    4B7I    4BM7    4BSV    4BSW    4BYH    4CDH    4D9Q    4D9R    4DAG    4DZ8    4EOW    4J12    4KU1    4LLD    4LLM    4LLQ    4N0U    4NQS    4NQT    4NQU    4NWT    4NWU    4O4Y    4O51    4Q6Y    4Q74    4Q7D    4W4N    4W4O    4WI2    4WI3    4WI4    4WI5    4WI6    4WI7    4WI8    4WI9    4X4M    4X98    4X99    4ZNE    5BW7    5HSF   
SCOP (Structural Classification of Proteins)1AJ7    1AQK    1BEY    1D5B    1D5I    1D6V    1DFB    1DN2    1E4K    1FC1    1FC2    1FCC    1GAF    1H3T    1H3U    1H3V    1H3W    1H3X    1H3Y    1HKL    1HZH    1I7Z    1L6X    1N7M    1OP3    1OQO    1OQX    1T83    1T89    1VGE    2DTS    2GJ7    2I5Y    2IWG    2J6E    2JB5    2JB6    2O5X    2O5Y    2O5Z    2OSL    2QAD    2QL1    2QQK    2QQL    2QQN    2QR0    2R56    2RCJ    2RCS    2VXQ    2WAH    3AGV    3AVE    3AY4    3B2U    3B2V    3BDY    3BE1    3BKY    3BN9    3BQU    3C08    3C09    3C2S    3CFJ    3CFK    3CSY    3D0L    3D0V    3D6G    3D85    3DJ9    3DNK    3DO3    3DRO    3DRQ    3DVG    3DVN    3EYF    3EYO    3EYQ    3FJT    3O11    3RY6    3S7G    3SGJ    3SGK    3TV3    3TWC    3TYG    3U0W    3U7W    3U7Y    3V7M    3V8C    3V95    3WJJ    3WJL    3WKN    3WN5    4ACP    4B7I    4BM7    4BSV    4BSW    4BYH    4CDH    4D9Q    4D9R    4DAG    4DZ8    4EOW    4J12    4KU1    4LLD    4LLM    4LLQ    4N0U    4NQS    4NQT    4NQU    4NWT    4NWU    4O4Y    4O51    4Q6Y    4Q74    4Q7D    4W4N    4W4O    4WI2    4WI3    4WI4    4WI5    4WI6    4WI7    4WI8    4WI9    4X4M    4X98    4X99    4ZNE    5BW7    5HSF   
CATH (Classification of proteins structures)1AJ7    1AQK    1BEY    1D5B    1D5I    1D6V    1DFB    1DN2    1E4K    1FC1    1FC2    1FCC    1GAF    1H3T    1H3U    1H3V    1H3W    1H3X    1H3Y    1HKL    1HZH    1I7Z    1L6X    1N7M    1OP3    1OQO    1OQX    1T83    1T89    1VGE    2DTS    2GJ7    2I5Y    2IWG    2J6E    2JB5    2JB6    2O5X    2O5Y    2O5Z    2OSL    2QAD    2QL1    2QQK    2QQL    2QQN    2QR0    2R56    2RCJ    2RCS    2VXQ    2WAH    3AGV    3AVE    3AY4    3B2U    3B2V    3BDY    3BE1    3BKY    3BN9    3BQU    3C08    3C09    3C2S    3CFJ    3CFK    3CSY    3D0L    3D0V    3D6G    3D85    3DJ9    3DNK    3DO3    3DRO    3DRQ    3DVG    3DVN    3EYF    3EYO    3EYQ    3FJT    3O11    3RY6    3S7G    3SGJ    3SGK    3TV3    3TWC    3TYG    3U0W    3U7W    3U7Y    3V7M    3V8C    3V95    3WJJ    3WJL    3WKN    3WN5    4ACP    4B7I    4BM7    4BSV    4BSW    4BYH    4CDH    4D9Q    4D9R    4DAG    4DZ8    4EOW    4J12    4KU1    4LLD    4LLM    4LLQ    4N0U    4NQS    4NQT    4NQU    4NWT    4NWU    4O4Y    4O51    4Q6Y    4Q74    4Q7D    4W4N    4W4O    4WI2    4WI3    4WI4    4WI5    4WI6    4WI7    4WI8    4WI9    4X4M    4X98    4X99    4ZNE    5BW7    5HSF   
SuperfamilyP01857
Peptide AtlasP01857
Protein Interaction databases
DIP (DOE-UCLA)P01857
IntAct (EBI)P01857
BioGRIDIGHG1
STRING (EMBL)IGHG1
ZODIACIGHG1
Ontologies - Pathways
QuickGOP01857
Ontology : AmiGOantigen binding  serine-type endopeptidase activity  protein binding  extracellular region  extracellular space  proteolysis  phagocytosis, recognition  phagocytosis, engulfment  complement activation  complement activation, classical pathway  complement activation, classical pathway  external side of plasma membrane  immunoglobulin receptor binding  Fc-gamma receptor signaling pathway involved in phagocytosis  immunoglobulin complex, circulating  defense response to bacterium  innate immune response  B cell receptor signaling pathway  positive regulation of B cell activation  extracellular exosome  blood microparticle  
Ontology : EGO-EBIantigen binding  serine-type endopeptidase activity  protein binding  extracellular region  extracellular space  proteolysis  phagocytosis, recognition  phagocytosis, engulfment  complement activation  complement activation, classical pathway  complement activation, classical pathway  external side of plasma membrane  immunoglobulin receptor binding  Fc-gamma receptor signaling pathway involved in phagocytosis  immunoglobulin complex, circulating  defense response to bacterium  innate immune response  B cell receptor signaling pathway  positive regulation of B cell activation  extracellular exosome  blood microparticle  
NDEx NetworkIGHG1
Atlas of Cancer Signalling NetworkIGHG1
Wikipedia pathwaysIGHG1
Orthology - Evolution
OrthoDB3500
Phylogenetic Trees/Animal Genes : TreeFamIGHG1
HOVERGENP01857
HOGENOMP01857
Homologs : HomoloGeneIGHG1
Homology/Alignments : Family Browser (UCSC)IGHG1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerIGHG1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)IGHG1
dbVarIGHG1
ClinVarIGHG1
1000_GenomesIGHG1 
Exome Variant ServerIGHG1
ExAC (Exome Aggregation Consortium)IGHG1 (select the gene name)
Genetic variants : HAPMAP3500
Genomic Variants (DGV)IGHG1 [DGVbeta]
DECIPHER (Syndromes)14:106207814-106209400  
CONAN: Copy Number AnalysisIGHG1 
Mutations
ICGC Data PortalIGHG1 
TCGA Data PortalIGHG1 
Broad Tumor PortalIGHG1
OASIS PortalIGHG1 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDIGHG1
BioMutasearch IGHG1
DgiDB (Drug Gene Interaction Database)IGHG1
DoCM (Curated mutations)IGHG1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)IGHG1 (select a term)
intoGenIGHG1
Cancer3DIGHG1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM147100   
Orphanet10899   
MedgenIGHG1
Genetic Testing Registry IGHG1
NextProtP01857 [Medical]
TSGene3500
GENETestsIGHG1
Huge Navigator IGHG1 [HugePedia]
snp3D : Map Gene to Disease3500
BioCentury BCIQIGHG1
ClinGenIGHG1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD3500
Chemical/Pharm GKB GenePA29716
Clinical trialIGHG1
Miscellaneous
canSAR (ICR)IGHG1 (select the gene name)
Probes
Litterature
PubMed67 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineIGHG1
EVEXIGHG1
GoPubMedIGHG1
iHOPIGHG1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Mar 30 15:04:54 CEST 2017

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