Atlas of Genetics and Cytogenetics in Oncology and Haematology


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IGHV1OR15-1 (immunoglobulin heavy variable 1/OR15-1 (non-functional))

Identity

Alias_namesimmunoglobulin heavy variable 1/OR15-1
immunoglobulin heavy variable 1/OR15-1 pseudogene
immunoglobulin heavy variable 1/OR15-1 (pseudogene)
Alias_symbol (synonym)IGHV1/OR15-1
Other aliasIGHV1OR151
HGNC (Hugo) IGHV1OR15-1
LocusID (NCBI) 388077
Atlas_Id 78460
Location 15q11.2  [Link to chromosome band 15q11]
Location_base_pair Starts at 22448240 and ends at 22448881 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)IGHV1OR15-1   5563
Cards
Entrez_Gene (NCBI)IGHV1OR15-1  388077  immunoglobulin heavy variable 1/OR15-1 (non-functional)
AliasesIGHV1/OR15-1; IGHV1OR151
GeneCards (Weizmann)IGHV1OR15-1
Ensembl hg19 (Hinxton) [Gene_View]  chr15:22448240-22448881 [Contig_View]  IGHV1OR15-1 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr15:22448240-22448881 [Contig_View]  IGHV1OR15-1 [Vega]
TCGA cBioPortalIGHV1OR15-1
AceView (NCBI)IGHV1OR15-1
Genatlas (Paris)IGHV1OR15-1
WikiGenes388077
SOURCE (Princeton)IGHV1OR15-1
Genetics Home Reference (NIH)IGHV1OR15-1
Genomic and cartography
GoldenPath hg19 (UCSC)IGHV1OR15-1  -     chr15:22448240-22448881 -  15q11.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)IGHV1OR15-1  -     15q11.2   [Description]    (hg38-Dec_2013)
EnsemblIGHV1OR15-1 - 15q11.2 [CytoView hg19]  IGHV1OR15-1 - 15q11.2 [CytoView hg38]
Mapping of homologs : NCBIIGHV1OR15-1 [Mapview hg19]  IGHV1OR15-1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)IGHV1OR15-1
Cluster EST : UnigeneHs.458446 [ NCBI ]
CGAP (NCI)Hs.458446
Gene ExpressionIGHV1OR15-1 [ NCBI-GEO ]   IGHV1OR15-1 [ EBI - ARRAY_EXPRESS ]   IGHV1OR15-1 [ SEEK ]   IGHV1OR15-1 [ MEM ]
Gene Expression Viewer (FireBrowse)IGHV1OR15-1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)388077
GTEX Portal (Tissue expression)IGHV1OR15-1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)IGHV1OR15-1
DMDM Disease mutations388077
Blocks (Seattle)IGHV1OR15-1
IPIIPI00009792   
Protein Interaction databases
BioGRIDIGHV1OR15-1
STRING (EMBL)IGHV1OR15-1
ZODIACIGHV1OR15-1
Ontologies - Pathways
Huge Navigator IGHV1OR15-1 [HugePedia]
snp3D : Map Gene to Disease388077
BioCentury BCIQIGHV1OR15-1
ClinGenIGHV1OR15-1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD388077
Chemical/Pharm GKB GenePA35164
Clinical trialIGHV1OR15-1
Miscellaneous
canSAR (ICR)IGHV1OR15-1 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineIGHV1OR15-1
EVEXIGHV1OR15-1
GoPubMedIGHV1OR15-1
iHOPIGHV1OR15-1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:08:36 CET 2017

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