Atlas of Genetics and Cytogenetics in Oncology and Haematology


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IGHV1OR15-3 (immunoglobulin heavy variable 1/OR15-3 (pseudogene))

Identity

Alias_namesimmunoglobulin heavy variable 1/OR15-3
immunoglobulin heavy variable 1/OR15-3 pseudogene
Alias_symbol (synonym)IGHV1/OR15-3
Other aliasIGHV1OR153
HGNC (Hugo) IGHV1OR15-3
LocusID (NCBI) 646370
Atlas_Id 78579
Location 15q11.2  [Link to chromosome band 15q11]
Location_base_pair Starts at 21735258 and ends at 21735999 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)IGHV1OR15-3   5565
Cards
Entrez_Gene (NCBI)IGHV1OR15-3  646370  immunoglobulin heavy variable 1/OR15-3 (pseudogene)
AliasesIGHV1OR153
GeneCards (Weizmann)IGHV1OR15-3
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr15:21735258-21735999 [Contig_View]  IGHV1OR15-3 [Vega]
TCGA cBioPortalIGHV1OR15-3
AceView (NCBI)IGHV1OR15-3
Genatlas (Paris)IGHV1OR15-3
WikiGenes646370
SOURCE (Princeton)IGHV1OR15-3
Genetics Home Reference (NIH)IGHV1OR15-3
Genomic and cartography
GoldenPath hg38 (UCSC)IGHV1OR15-3  -     chr15:21735258-21735999 -  15q11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)IGHV1OR15-3  -     15q11.2   [Description]    (hg19-Feb_2009)
EnsemblIGHV1OR15-3 - 15q11.2 [CytoView hg19]  IGHV1OR15-3 - 15q11.2 [CytoView hg38]
Mapping of homologs : NCBIIGHV1OR15-3 [Mapview hg19]  IGHV1OR15-3 [Mapview hg38]
Gene and transcription
Genbank (Entrez)DB112732
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)IGHV1OR15-3
Cluster EST : UnigeneHs.737645 [ NCBI ]
CGAP (NCI)Hs.737645
Gene ExpressionIGHV1OR15-3 [ NCBI-GEO ]   IGHV1OR15-3 [ EBI - ARRAY_EXPRESS ]   IGHV1OR15-3 [ SEEK ]   IGHV1OR15-3 [ MEM ]
Gene Expression Viewer (FireBrowse)IGHV1OR15-3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)646370
GTEX Portal (Tissue expression)IGHV1OR15-3
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)IGHV1OR15-3
DMDM Disease mutations646370
Blocks (Seattle)IGHV1OR15-3
Protein Interaction databases
BioGRIDIGHV1OR15-3
STRING (EMBL)IGHV1OR15-3
ZODIACIGHV1OR15-3
Ontologies - Pathways
Huge Navigator IGHV1OR15-3 [HugePedia]
snp3D : Map Gene to Disease646370
BioCentury BCIQIGHV1OR15-3
ClinGenIGHV1OR15-3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD646370
Chemical/Pharm GKB GenePA35166
Clinical trialIGHV1OR15-3
Miscellaneous
canSAR (ICR)IGHV1OR15-3 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineIGHV1OR15-3
EVEXIGHV1OR15-3
GoPubMedIGHV1OR15-3
iHOPIGHV1OR15-3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:53:13 CEST 2017

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